Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1584 ATGATATCATTTGTCCTACGAAAGTACTTGGGAATATCAGGAGCAAATTTTGCTAAAAATCTTCTGCGTGCAACAATCCTTTTGCAGTATTTTCCCAGATTATTCAGGTTTCTGCCTCTGCTAATTGGCCAGTCTCCTACAGGATTCATATTTGAGTCAGCTTGGGCAAATTTCATTATAAATCTTCTTTTTTTTATCCTATCTGGCCATGTTGTTGGTTCTGGCTGGAACCTCTTTGGTCTGCAGAGGGTTAATCAATGCTTGCGAAAGGCCTGCCAACATTCTAATATTACTGGATGCTCAACATTTATTGATTGTGGCAGTGACCGTGCATCTGACCAATCAGAACTGTGGAACAAAAATGTAAATGCCACTGCTTGTTTGGATTCCAGTTCCGGTGCTTTTCCATATGGGATCTATGTACATGTTGTACCACTTACTATAGAAACTAGGGTGGTCAAAAAATATGTATTTGCACTGTTTTGGGGCTTCCAGATCAACATGAGGCTGCTGAAGGAGTCCTTCTTGATGATGATTTGA 540 0.4019 MISFVLRKYLGISGANFAKNLLRATILLQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLFFILSGHVVGSGWNLFGLQRVNQCLRKACQHSNITGCSTFIDCGSDRASDQSELWNKNVNATACLDSSSGAFPYGIYVHVVPLTIETRVVKKYVFALFWGFQINMRLLKESFLMMI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1584 179 Pfam Ion transport protein 24 165 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso4g1584 179 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 1 165 - -
Gso4g1584 179 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1584 Gso-Chr4 45467752 45471073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1584 1 165 Ion Channels AT3G17700 55.422 2.04e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1584 K05391 - gsj:114409873 350.903