Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1583 ATGCATAGTCTCACAATCCTTTTCGTGGATCATGATTCTGTCTGCAGATCAAGGATTGGAGAGGGAGCTCATGCCAAAGTCTATGAGGGAAAATATAAAAACCAAACTGTTGCTTTTAAAATTGTACATAAAGGAGAAACGACAGAAGACATTGCCAAGAGAGAAGGGCGCTTTGCGAGGGAGGTGGCGATGTTGTCTAGAGTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCTTGTAAGGAGCCAGTAATGGTGATAGTCACTGAGCTGTTATTAGGAGGAACATTGCGCAAGTATTTGCTTAGCATGCGCCCCAAATGCTTGGATAGACATGTTGCGATTGGTTATGCACTTGATATTGCTCGGGCTATGGAGTGCCTGCATTCTCATGGGATCATCCACCGAGATCTTAAACCTGATAACTTGCTATTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCATTAACTGAGATGATGACTGCTGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGTACTGTCACACTAAGGCAAGGGGAGAAGAAGCATTACAACCATAAAGTTGATGCTTATAGTTTTGCAATTGTGTTGTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAGGCAGCATATGCTGCAGCCTTTAAGAATGTAAGGCCAAGTGCAGAAAATCTTCCCGAGGAATTGGCTGTAATTCTTACTTCATGCTGGCAAGAGGACTCAAATGCTCGACCCAACTTCACCCAGATAATCCAAATGCTCCTAAATTATCTTTACACTGTCGCACCGCCTGAACCCATGACTCCTTCAAGAATATTCAATTCTGAGAACACAGTCTTGCCACCGGAGTCCCCTGGTACTAGCTCCTTAATGGCAAAACGTGATGGCACAGGTGATACACCAAGAGCAAAGGACGAAATCAAGCCTAACGGCTTTCTTTGCTGCTTTAGTCAGTGTTATTAA 1020 0.4343 MHSLTILFVDHDSVCRSRIGEGAHAKVYEGKYKNQTVAFKIVHKGETTEDIAKREGRFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLSMRPKCLDRHVAIGYALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKVPFEGMSNLQAAYAAAFKNVRPSAENLPEELAVILTSCWQEDSNARPNFTQIIQMLLNYLYTVAPPEPMTPSRIFNSENTVLPPESPGTSSLMAKRDGTGDTPRAKDEIKPNGFLCCFSQCY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1583 339 ProSiteProfiles Protein kinase domain profile. 13 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1583 339 Gene3D Phosphorylase Kinase; domain 1 9 92 - -
Gso4g1583 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gso4g1583 339 Pfam Protein tyrosine and serine/threonine kinase 17 273 IPR001245 GO:0004672|GO:0006468
Gso4g1583 339 MobiDBLite consensus disorder prediction 295 322 - -
Gso4g1583 339 SMART serkin_6 13 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1583 339 CDD STKc_MAP3K-like 19 273 - -
Gso4g1583 339 ProSitePatterns Protein kinases ATP-binding region signature. 19 40 IPR017441 GO:0005524
Gso4g1583 339 SUPERFAMILY Protein kinase-like (PK-like) 16 301 IPR011009 -
Gso4g1583 339 PRINTS Tyrosine kinase catalytic domain signature 89 102 IPR001245 GO:0004672|GO:0006468
Gso4g1583 339 PRINTS Tyrosine kinase catalytic domain signature 127 145 IPR001245 GO:0004672|GO:0006468
Gso4g1583 339 PRINTS Tyrosine kinase catalytic domain signature 201 223 IPR001245 GO:0004672|GO:0006468
Gso4g1583 339 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672|GO:0006468
Gso4g1583 339 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 15 314 - -
Gso4g1583 339 PANTHER SERINE-THREONINE PROTEIN KINASE 15 314 - -
Gso4g1583 339 Gene3D Transferase(Phosphotransferase) domain 1 94 285 - -
Gso4g1583 339 MobiDBLite consensus disorder prediction 295 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1583 Gso-Chr4 45457325 45461904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1583 18 339 MAP Kinase Kinase Kinase AT5G50180 81.677 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso4g1583 PK_Tyr_Ser-Thr 1.5e-56 CL0016