Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1551 ATGCAGAGCGCGGCTTTCACTTTCTCTCCCTCTCTCCCTCTCCGCAACCCTTCCCCTAACTATTGGAGGAGACCTTCTCTCTCCCTCCGTCTCTCGGCCAAACACGGCAACAGCAACAGCGATGACGTGAACTCCAATGGCGTTTCTTCAACTTTCTTCACTCGCCGATCTTGGACTCTTCCTCCTTCCTCTTCCTTCAAGTTCAGGCCTCTCCCTCCCCGCGCCGCCGAAAGCGCCGTTCCCGAAAGTGCGCCCGTCGAAAACCCGCTCTTCAAAACTCTCGAACTCGGCGCCTTGTTTGGCCTCTGGTACCTCTTCAACATCTACTTCAACATCTACAACAAACAGGTGTTGAAGGCGTTTCATTACCCGGTAACTGTGACTGTTGTTCAGTTTGCTGTTGGGACTGTGCTCGTGGCATTTATGTGGGGTTTGAATCTCTATAAGAGGCCTAAACTCAGTGGTGCTATGCTTGGAGCGATTTTGCCGCTGGCTGCAGTGCATACTTTGGGGAACCTTTTCACTAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCACACTATCAAAGCCATGGAGCCTTTCTTTTCAGTGGTCCTTTCTGCCATGTTCCTTGGAGAGTTTCCTACACCGTGGGTGGTTGGTTCTCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCATCTGTTACAGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCATCCAATGTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGGCCATGGTTAATAAAGAGGATTCTATGGACAACATTACTCTCTTCTCTATCATAACAGTAATGTCCTTCTTCTTGTTAGCACCTGTGGCTATCTTCATGGAGGGTGTCAAATTTACTCCTGCTTACTTGCAATCTGCTGGGGTGAATGTTAGACAACTTTACATCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCGTATCAACAAGTTTCTTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCCGTGGGCAACTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCACCTGTGAATGCTTTTGGAACTGCTATAGCTCTTGCTGGCGTTTTCCTCTATTCAAGGGTGAAGCGTATTAAGGCAAAGCCAAAAATAGCTTAA 1191 0.4752 MQSAAFTFSPSLPLRNPSPNYWRRPSLSLRLSAKHGNSNSDDVNSNGVSSTFFTRRSWTLPPSSSFKFRPLPPRAAESAVPESAPVENPLFKTLELGALFGLWYLFNIYFNIYNKQVLKAFHYPVTVTVVQFAVGTVLVAFMWGLNLYKRPKLSGAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEFPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKAMVNKEDSMDNITLFSIITVMSFFLLAPVAIFMEGVKFTPAYLQSAGVNVRQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKAKPKIA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1551 396 PANTHER SOLUTE CARRIER FAMILY 35 92 369 - -
Gso4g1551 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 230 - -
Gso4g1551 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 283 387 - -
Gso4g1551 396 Pfam Triose-phosphate Transporter family 95 384 IPR004853 -
Gso4g1551 396 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 92 369 - -
Gso4g1551 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 94 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1551 Gso-Chr4 44909490 44913652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1551 1 396 Antiporters AT5G33320 70.460 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1551 K15283 - gmx:732612 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1551 4 44909490 44913652 Gso6g1525 6 15578068 15583052 GST
Gso17g0746 17 6882370 6886461 Gso4g1551 4 44909490 44913652 PCT
Gso4g1551 4 44909490 44913652 Gso17g0746 17 6882370 6886461 PCT