Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1550 ATGGAAGAAACATTTGTTCCCTTACGTGGCATTAAGAACGACCTCAAAGCAAGAATTCCGTGCTATAGACAAGATTGGACTAGTGGATTCCAAGCTGGAATCAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAATACTGATGGAAGTCTCACTGCTGTGCAGACTCTTGCATCAACTGCACTATGCGGTATTATCCACTCAATCATTGGAGGGCAGCCTCTCCTCATACTAGGTGTAGCTGAGCCAACAGTCCTGATGTATACATTCATGTATAACTTTGCTAAGGATCGCCAAGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTCTGTGTTTGGACTGCCCTGTTGCTGTTCTTGCTGGCCGTTCTTGGTGCATGCTCAATAATCAATAGATTCACACGCCTTGCTGGTGAATTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGTCTTGTGGAAGAGTTTGGTGCACCCAAGAACCAGAGAGAAGGTACCAATCAGATTGCACTTCAATCATCTTGGCTATTTGGCAATGGAATGTTTGCTTTAGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTTCAAAGCCGCAAGGCTAGATCCTGGCGTTATGGCTCAGGTTGGCTACGAGGATTCATAGCTGATTATGGAGTCCCACTAATGGTCCTCATATGGACTGCCGTGTCTTACATACCAGTCAATGAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCCCCCTTATATATTGTTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCTCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGCTGCTCTTAGGATTTTTGACCATATTGTGTGGACTTATTGGAATCCCTCCTTCCAATGGTGTGATTCCACAATCTCCAATGCATACGAAGAGCTTGGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTTGTATCTACTGCACGAAAAAGCATGCGGAGAAATGTTAATTTGAGCCAGTTATACCAAAATATGAAAGAAGCATATGATGAAATTCAGACTCCATTGGTTCCCCAAATGCCAACTACATTGGGGCTGAAAGAACTGAAGGAATCTACTATTGAACTGGCTTCAAGTCAAGGATATATTGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTGGATGACCTTTTGCCAGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTACTGCAGGCATTGATGGTTGCGGCTTGTGTTGCTGCTATGCCCGTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGCTTGCCAGGAAATCAATTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCAAGTCGAAGATACATACTGTTGGAGGAATACCATGCCACCTTTGTTGAGACCGTGCCCTTCAAAACAATTGCCATGTTTACTGTGTTCCAGACAGTGTACTTGCTTCTCTGCTTCGGCATAACCTGGATACCAATTGCTGGGGTTCTTTTCCCATTGTTAATCATGCTTCTTGTCCCTGTACGGCAATATTTTCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAAGAGCTGGATGCAGCAGCATACGAGGAAGCACCTGCTATTGCTTTCAACATGTCCTTTGAAGGTCCAAGTAGCCAGGCACCAACAATCAATATCAGCGGTGGGGAAATTCTTGATGAAGTTATTACGAGGAGTCGTGGTGAGTTTCGCCGCACTCAAAGCCCCAAAACAACAAGTTCAACTCCAACTTCAACAGGAGATATAAGACCAGCCAATAGCCCTCAGTTAGCAAGGAGGATTCCCAGCCCTCGAGTAACTGAATTGAGAGGGGAAAGCAGCCTCAGACCAACCGGGAAGGAGATCAAGTTAATGCAAACACCTAGTCCACGGTCACCAGGTCTTGGAAAAGTTACCAAAGATTTGCCTTGA 2163 0.4387 MEETFVPLRGIKNDLKARIPCYRQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGSLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRQDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVEEFGAPKNQREGTNQIALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGSGWLRGFIADYGVPLMVLIWTAVSYIPVNEVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQNMKEAYDEIQTPLVPQMPTTLGLKELKESTIELASSQGYIDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYILLEEYHATFVETVPFKTIAMFTVFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGPSSQAPTINISGGEILDEVITRSRGEFRRTQSPKTTSSTPTSTGDIRPANSPQLARRIPSPRVTELRGESSLRPTGKEIKLMQTPSPRSPGLGKVTKDLP* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1550 720 MobiDBLite consensus disorder prediction 650 669 - -
Gso4g1550 720 MobiDBLite consensus disorder prediction 642 720 - -
Gso4g1550 720 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Gso4g1550 720 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Gso4g1550 720 Pfam HCO3- transporter family 8 181 IPR011531 GO:0006820|GO:0016021
Gso4g1550 720 PANTHER BORON TRANSPORTER 2-RELATED 1 707 - -
Gso4g1550 720 PANTHER ANION EXCHANGE PROTEIN 1 707 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gso4g1550 720 Gene3D Helical hairpin bin 17 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1550 Gso-Chr4 44845138 44851080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1550 1 697 Antiporters AT3G62270 74.892 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1550 K24194 - gmx:100793554 1404.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1550 4 44845138 44851080 Gso6g1527 6 15615272 15621193 GST
Gso5g0321 5 3349744 3355853 Gso4g1550 4 44845138 44851080 PCT
Gso4g1550 4 44845138 44851080 Gso5g0321 5 3349744 3355853 PCT