Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1536 ATGAACGAAGGAAATGATGGGTTTGTGAGAGCAGATCAGATTGATCTGAAGAGCATCGATGAGCAGCTCGAGAGGCACCTCAGCAAGGTTCTGATGAAGCAGAAGGAAGAGGACGATGCTGGCTCTGATCATTCTCGTCACTCTAGCTCCTTTGCCACTGCAACTAAGTTCAAAAGTGTTGCGGGTAGTGCTGGCGCCACTACCTTCAAGAAGCAGAGGCAGGAGTGGGAAATTGACCCTTCTAACCTCATCATCAAGAGTGTCATAGCCAGGGGAACCTTCGGCACTGTCCACCGCGGCATCTACGATGGCCAAGATGTTGCTGTTAAAATGCTGGACTGGGGTGAAGAAGGGCACCGGACAGAGGCTGAAATTGCTGCCCTCAGGTCAGCGTTTACACAAGAAGTTGCTGTTTGGCATAAACTTGAACATCCTAATGTCACCAAGTTTATAGGGGCAACAATGGGGTCGTCAGAATTACAGATACAGACTGATAATGGTCTAATTAGCATGCCAAGCAATATCTGCTGTGTCGTTGTAGAGTATCTTGCTGGAGGTACGCTGAAATCTTTCCTAATAAAGAATAGGAGGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGGTTGTCCACAGAGATGTAAAGACAGAGAACATGCTGTTGGACAAGACACGCACTGTCAAAATTGCTGATTTTGGAGTTGCACGTGTTGAAGCATCAAATCCTAATGACATGACTGGGGAGACTGGTACACTTGGTTACATGGCTCCTGAGGTTTTGAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTGTGGGAAATATATTGCTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGATTACTTCCGCTGTTGTTCGGCAGAATCTGAGACCAGAAATACCAAGATGTTGCCCAAGTTCTTTGGCAAACGTGATGAAACGATGTTGGGATGCCAATCCCGATAAACGGCCCGAAATGGATGAGGTAGTTGCCATGATAGAGGCCATTGACACATCCAAAGGTGGAGGTATGATCCCTGTTGATCAGCAGCAGGGTTGTTTTTGCTTCCGTAAGCACAGAGGACCTTGA 1161 0.466 MNEGNDGFVRADQIDLKSIDEQLERHLSKVLMKQKEEDDAGSDHSRHSSSFATATKFKSVAGSAGATTFKKQRQEWEIDPSNLIIKSVIARGTFGTVHRGIYDGQDVAVKMLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLEHPNVTKFIGATMGSSELQIQTDNGLISMPSNICCVVVEYLAGGTLKSFLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKVVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVAMIEAIDTSKGGGMIPVDQQQGCFCFRKHRGP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1536 386 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 380 - -
Gso4g1536 386 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1536 386 Pfam Protein tyrosine and serine/threonine kinase 85 355 IPR001245 GO:0004672|GO:0006468
Gso4g1536 386 SUPERFAMILY Protein kinase-like (PK-like) 66 356 IPR011009 -
Gso4g1536 386 PRINTS Tyrosine kinase catalytic domain signature 180 193 IPR001245 GO:0004672|GO:0006468
Gso4g1536 386 PRINTS Tyrosine kinase catalytic domain signature 218 236 IPR001245 GO:0004672|GO:0006468
Gso4g1536 386 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Gso4g1536 386 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672|GO:0006468
Gso4g1536 386 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1536 386 Gene3D Phosphorylase Kinase; domain 1 71 166 - -
Gso4g1536 386 Gene3D Transferase(Phosphotransferase) domain 1 184 376 - -
Gso4g1536 386 CDD STKc_MAP3K-like 89 357 - -
Gso4g1536 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 380 - -
Gso4g1536 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1536 Gso-Chr4 44451357 44456378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1536 2 386 MAP Kinase Kinase Kinase AT3G22750 63.496 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso4g1536 PK_Tyr_Ser-Thr 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1536 - - gmx:100791455 786.563