Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1513 ATGCTCCATCTCAAAATTGCTCTTGTTCTTCTTTCAAGTCAAACGCTTCGAGGATTGCAATTTGAGGACTTGCTTGGTGCCCCTGCTGAATTGATTAGGAGGGGAAAGCATGGAAGCCTCTACAAGGTTATGCTCGATAATGTGGTGCTGTTGGCAGTGAAGAGGATCAAGGATTGGGGGATTTCCAAGCAAGATTTTGAGAGAAGGATGAATTTGATAGCCCAAGTGAAGCATCCACGCGTATTGCCACCCGTTGCATACTATTGCTCTCAGCAAGAGAAGCTCCTAGCATATAAATATCTGCAGAATGGTAGTCTCTTCATGTTGCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGGGAAGCAGACTAAATGTTGCTGCTAAGATAGCTGAGGCTTTGGCATATGTGCATGAGGAGTTTCTTGAGAATGGAATAGCACATGGTAACTTAAAGTCAAGTAACATTTTGTTTGGCAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGGCAGAGAATCAAGATCAATTTGTCCATTCTCACAACAAAGGTCTCAAAAGCAAAGATCTAATTGCATCCATCTTCAAAGCTGATGTACATGCCTTTGGTTCGATACTTCTCGAGCTGCTGACAGGGAAAGTAATTAAAAATGATGGATTTGATCTAGTCAAATGGGTGAATTCAGTGGTCAGAGAGGAATGGACTTTTGAAGTTTTCGACAAGTCCCTAATCTCACGAGGTGCTTCTGAAGAGAGAATGATGAGTTTGTTGCAGGTAGCACTAAAATGCGTTAATCCTTCTCCCAATGATAGGCCAAGTATGAGCCAAGTTGCAGAGATGACAAATTCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 903 0.4186 MLHLKIALVLLSSQTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNVVLLAVKRIKDWGISKQDFERRMNLIAQVKHPRVLPPVAYYCSQQEKLLAYKYLQNGSLFMLLYGSQSGHSFDWGSRLNVAAKIAEALAYVHEEFLENGIAHGNLKSSNILFGKNMDPCISEYGLMMAENQDQFVHSHNKGLKSKDLIASIFKADVHAFGSILLELLTGKVIKNDGFDLVKWVNSVVREEWTFEVFDKSLISRGASEERMMSLLQVALKCVNPSPNDRPSMSQVAEMTNSLIEEEEKSISFDT* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1513 300 PANTHER OS05G0588300 PROTEIN 7 299 - -
Gso4g1513 300 Pfam Protein kinase domain 32 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1513 300 SUPERFAMILY Protein kinase-like (PK-like) 30 284 IPR011009 -
Gso4g1513 300 Gene3D Phosphorylase Kinase; domain 1 11 100 - -
Gso4g1513 300 Gene3D Transferase(Phosphotransferase) domain 1 101 299 - -
Gso4g1513 300 PANTHER OS10G0387400 PROTEIN 7 299 - -
Gso4g1513 300 ProSiteProfiles Protein kinase domain profile. 26 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1513 Gso-Chr4 44037764 44039698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1513 21 284 Receptor kinase-like Gene Family AT5G05160 37.906 5.69e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso4g1513 Pkinase 1.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1513 - - gsj:114409807 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1513 4 44037764 44039698 Gso6g1554 6 16006669 16009352 GST