Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1489 ATGTCAGCACCTAGTCATGCAATTGTAAAGGCTGTGGCTGCCACAGCTGGTGCTATGTTACTTATTGCTGCGATATTTGTTTACCTTTTTTACAAACATGTTCTTGCTAGATACCACCAGAGACACAAAGTTGGTGCAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATAAACAAAGTTGGTGGCAATGTGAAGGGACTAATTGTTGAAGAAAATGGGGTTGATGTTCTTTATGTGATGGACACAGAAAGAAGGCCATTGATTACTGGTTTCTCTAACAGTATATTCAATCCAAGTTATGAACATGATGAGGAAGAAAAGAGAATAGATATAATGGTCCAAAGGTCCAAAGTATCCAAGCCTGAAATTCCACAGGCATGTGAATCTCCAAGTGTTGTTGGTCATGAGAATCAAGTTAAGCCAGTGTCACAAACATCATCAGTTTCAACATCACTAGCACCAAGACAAAACTTGCCACAATCACCTCAGCTAGCACCTCCACTTCAACCACTTCCACAATCTTCACCAATGATTCTTGAGAACAAGAAAACTCAACCATCATCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCAACTCGCCCTCCGCCACCACCACCTGGTCCACCTCCACTTCCTAAAGCCAGTGGCTTCATTTCATCCCTGAAACCCCCACCCGCTCCCAAAGGGAAAACAAACATAAGAAGCACTAAAGAGGGTATGATAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAAACAAGGCTGAAGCCTCTACATTGGGATAAGATTGTAGCAAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTAATTGAATCACTCTTTGGATATTCAAGCAGCTACAAAACCCAAGAAAGAAACAGAACACTTTCCACTTTGGCCAAGTCCAATTCCAATGCGCCAACTCAAATATTCATTCTTGAGCCAAGAAAATCTCAAAACACAGCAATTGTGCTAAGATCACTTGCCATTTCTCGCAAGGGAATCTTGGAAGCAGTTCTTGATGGTCAGGGACTAAGTGTTGAGACACTAGAAAGGCTCAGTAAAATAGCCCCCACCCAAGAAGAGGAAGCCAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTCGCCGATGCTGAGTCTTTCCTATACTACATTCTTAAATCAGTTCCTACAGCATTCAACCGTTTGAAAGCCATGCTTTTCAGGTCGAGTTACGATTGCGAAGTTCTGCAGCTCAAGGAACACCTACAAACACTTGAAATGGGTTGCAAGGAGCTGAGAACTAGTGGCCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAAGCCGGGAACCGGATGAATGCCGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGTTCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAATCAGAAGGAAAAAGACAAGCAATCTATCAAAAGCACAAACTTCACATAAGCAATGGTGAAACAAGCAATGTGAATAGACCTTATTCATATAGCCTCATACAACAAGAGGCAGAAAAAGAATATGTAATGCTTGGTTTGCAAGTGTTAGGTGGGCTAAGTGAAGAGTTGTCTGAAGCAAAGAAAGCAGCTAGTATTGAGTATCATAATTTCATCACTATGTGTTCAACTCTCAATGCTCATGTTAGTGAAATTAGACAGATTATAACTTGCTGTGGCAACACTAGAAGTGGCGAATTTATCAATGAAATGAAAGGGTTCCTAGAGGAATGTGAGGGAGAACTTGAGGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAAAACAAACGAGTACTATCTAGCAGGAGCATCCAAAGACAACATGGTAAATCCTTTTCAACTGTTTGTTATTGTAAAAAGTTTTGTTGACATGGTAGATCAGGCTTGCATAGAACTAAAAAACAAGGTAGAAAAGAAGAATATTGTGGGAGGAGAGGCTGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGACGCCACTCAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATGTGTCAGAATCTACATCTTCTAGCCAATCAGAAGATGATTTCTGA 2184 0.4185 MSAPSHAIVKAVAATAGAMLLIAAIFVYLFYKHVLARYHQRHKVGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFSNSIFNPSYEHDEEEKRIDIMVQRSKVSKPEIPQACESPSVVGHENQVKPVSQTSSVSTSLAPRQNLPQSPQLAPPLQPLPQSSPMILENKKTQPSSPPPPPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGMIGESSREKGVGQTRLKPLHWDKIVANVDHSTVWDQINDGSFRFDDELIESLFGYSSSYKTQERNRTLSTLAKSNSNAPTQIFILEPRKSQNTAIVLRSLAISRKGILEAVLDGQGLSVETLERLSKIAPTQEEEAKIIQFSGNPDQLADAESFLYYILKSVPTAFNRLKAMLFRSSYDCEVLQLKEHLQTLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSSLRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAIYQKHKLHISNGETSNVNRPYSYSLIQQEAEKEYVMLGLQVLGGLSEELSEAKKAASIEYHNFITMCSTLNAHVSEIRQIITCCGNTRSGEFINEMKGFLEECEGELEVVKEEQTRIMELVKKTNEYYLAGASKDNMVNPFQLFVIVKSFVDMVDQACIELKNKVEKKNIVGGEAVSTTPPLSPSKRTPLRFPNFDLYFLSNVSESTSSSQSEDDF* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1489 727 Coils Coil 604 624 - -
Gso4g1489 727 PANTHER FORMIN-LIKE PROTEIN 2 723 - -
Gso4g1489 727 SMART it6_source 251 680 IPR015425 -
Gso4g1489 727 SUPERFAMILY Formin homology 2 domain (FH2 domain) 205 679 - -
Gso4g1489 727 Pfam Formin Homology 2 Domain 256 665 IPR015425 -
Gso4g1489 727 PANTHER FORMIN-RELATED 2 723 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso4g1489 727 Gene3D Formin, FH2 domain 271 682 IPR042201 -
Gso4g1489 727 MobiDBLite consensus disorder prediction 187 217 - -
Gso4g1489 727 MobiDBLite consensus disorder prediction 122 257 - -
Gso4g1489 727 MobiDBLite consensus disorder prediction 138 161 - -
Gso4g1489 727 ProSiteProfiles Formin homology-2 (FH2) domain profile. 249 691 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1489 Gso-Chr4 43643960 43646819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1489 223 725 FH2 protein (formin) Gene Family AT1G70140 46.047 9.39e-147 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1489 - - gsj:114409782 1283.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1489 4 43643960 43646819 Gso6g1574 6 16319130 16322000 GST