Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1475 ATGTCCCAAGGATCTCCCCCACAAGACACCACCGAACCCTCGCCGGAACCCGATTCGTATAAGGAGGAAACAACCGCCACAACCACCAACAGCACCGCCGCCGATGCTGCTCCTCCCGCCCCCACCCGGAGCCCCCCCACCCGGAGCCGCCCCTCCCGAGCCTGCACCATGCGCACGGCTGCACGCCTCTACGCGGCGTCGCAGCCGGCGAGGCCAAAGGCCGCGAGGAGGGAGCCTCGCCGCGAGGAGTCGCCGTCGCCGCCGTCTCCGAAGCTGCAGCAATGCAGCAAGATCGTGACGCCGCTGGTGGAACCGCCCCCGCCGGTGCAGTTGCCGCGCTACAACCTCCGGTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTGTTTAGGCCACTTTTGAATATTTCAGTAGAATTTTCGGCTGAAGAGTTTGAGACGGCTTTGCTCACCCCGAATGACACATTGGGTGATATACATATGCCTTTGCTAAAGGCAATTCCTCCCATTACGCGAATGGCACTTTCACGTGATACTTGGATAACTGTGTTATGCAGAAAATTGAGAGATTGGTGGCACTGGGTTGCCAATGGGGATCTACCTATTGTTGCTTCACATGGAGCGGAGGTTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGATCATCCTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAGGTTACATTGACAGATCAATCAAACATGGCATTCCACTTTCAACATTCCGTAAGGAGCGTATTGGTGGTGATTCACACGGAATTTCTTATTGGTATGAAGACGACCAAATTATTGGTCATAGGTTGTATCGGGAAATAAGGAAAACTGAGGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCAGGATGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAACGGAGGCATCTGTAGGGAAGAAGGTGAAGATAGACATGCTCCCTGAAATCGAGAAAGTTCACAGGAGAAAGGAGAAGTTGCTGAAAAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGCTTGCCCCTGGGCGTTCACTTCGTGATAGAAAACCTGTTACCTACACTTTTGATGATTACGATCGATCCATCAGTGAAGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAACTTATACCCAGGAGAGAAGCAGGAGCAAAACATGCAGCTTTAACCAATGGTAAATGGAGTGGTCCTTCACATGACCCTCAAGACCTGAATTTTGGCATGCCATCACCAAAATCACCTGACTTCGATGATATGGAGGAAGATAATCAAACTGACATGTTGGACTTGGATCGAAGCAATCGGCGAAGACAGAAGCCTAAACGGTATTCGGAGAAAGAGTTTGTTGAAGCACTGTCGGATAATGAGGCTGACTATGACAGCGATGATGATATTGTTGGAGAAGCCGTGTATGATGAAGAGTATCTCCAGAAACGTAAGCAGAGAAAGAAGGCTTCTAGTAGCTCTGGGTCTGAAGGAGATGAAGAATATCATTGGGATGAAGATAATGTTGAAGATGAAGAAGACGATGACGAAGATTCCTTGAGTGCCAGTGAGGATAGTGACAAGCCTCGTAAAATCAAGCAACTGCCAGGCCGTACTAGGAAGGAAACTAAACTCAGGTCTGTGGGTGAGATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACAACAAAAAGCCGTATAAATTATCGAAGGTACGAGATATCTGATTCAGAAACAGAGTTCATTAAATCCGACAAGTCCAATGCATCAGACGATCACTCAGATCCTACTGAGAATGGGGAGTATATGATGGAAAGTGAAGACTCCGACAGCAATGACGAGGAAGAACAAGAAACCAAAGCAGTTGAGCCTGTTACTTACCCTGCAGAAGAAAACAACCAATCTCCTGCTGTAGGGGAGAATGAACAAAACCAAAACCAGCCTCCTGAAAAAGCCAGTAGCCCAGGTCAGGAAGTTGAGGGCACTGCAAAGCGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGATGATGGTCCAAATACAACAACACTGAAAGATGAAGGCAATGATGATAACTGA 2214 0.4711 MSQGSPPQDTTEPSPEPDSYKEETTATTTNSTAADAAPPAPTRSPPTRSRPSRACTMRTAARLYAASQPARPKAARREPRREESPSPPSPKLQQCSKIVTPLVEPPPPVQLPRYNLRSMWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVANGDLPIVASHGAEVEVYKSLDPGVRVIILKALCDIRVEQEDIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYWYEDDQIIGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRTEASVGKKVKIDMLPEIEKVHRRKEKLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSISEAIKITKRKPPSPELIPRREAGAKHAALTNGKWSGPSHDPQDLNFGMPSPKSPDFDDMEEDNQTDMLDLDRSNRRRQKPKRYSEKEFVEALSDNEADYDSDDDIVGEAVYDEEYLQKRKQRKKASSSSGSEGDEEYHWDEDNVEDEEDDDEDSLSASEDSDKPRKIKQLPGRTRKETKLRSVGEIQSGLRRSKRATTKSRINYRRYEISDSETEFIKSDKSNASDDHSDPTENGEYMMESEDSDSNDEEEQETKAVEPVTYPAEENNQSPAVGENEQNQNQPPEKASSPGQEVEGTAKRRFLDLNELAPSSGFDDGPNTTTLKDEGNDDN* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1475 737 MobiDBLite consensus disorder prediction 1 94 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 564 588 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 411 428 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 472 495 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 411 495 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 20 37 - -
Gso4g1475 737 PANTHER REMODELING AND SPACING FACTOR 1 27 736 IPR028938 GO:0006355|GO:0031213
Gso4g1475 737 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 27 736 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 541 563 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 669 694 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 607 641 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 519 540 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 642 658 - -
Gso4g1475 737 MobiDBLite consensus disorder prediction 519 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1475 Gso-Chr4 43393442 43403846 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gso4g1475 DDT 0.00012 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1475 - - gmx:100816258 1313.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1475 4 43393442 43403846 Gso6g1586 6 16477480 16487068 GST
Gso5g0261 5 2717826 2726647 Gso4g1475 4 43393442 43403846 PCT
Gso17g0803 17 7493131 7501764 Gso4g1475 4 43393442 43403846 PCT
Gso4g1475 4 43393442 43403846 Gso5g0261 5 2717826 2726647 PCT
Gso4g1475 4 43393442 43403846 Gso17g0803 17 7493131 7501764 PCT