Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1465 ATGGGAAACTGCAACGCCTGTGCGAAAGCTGATGTCGTAGAAGACAGCACCAACAACAGGAACAAGAAGTCTAATGAAACGAACCGCGGTGGTAGGAAGAAAGAGCAGAACCAGAAAAAACCGAACCCGTTCTCAGACGAACCGGCCCGGTCGGCGGCTCCGATCCGGGTCTTGAAGGACGTGATTCCAATGAGCCACCGGACGCGCATAAGCGACAAGTACATACTGGGCCGGGAACTGGGCCGGGGCGAGTTCGGCATCACCTACCTCTGCACGGACCGCGAGACCAAGGAGGCCCTGGCCTGCAAGTCGATTTCCAAGCGGAAGCTCCGAACCGCCGTGGACATCGAAGACGTGCGCCGCGAGGTCGCCATCATGTCCACGCTGCCGGAGCACCCCAACATAGTGAAGCTGAAGGCAACCTACGAGGACAACGAGAACGTCCACCTCGTCATGGAGCTCTGCGAGGGAGGCGAGCTCTTCGACCGGATTGTCGCCCGCGGTCACTACAGCGAGCGCGCCGCCGCTTCCGTGGCACGCACCATCGCCGAGGTTGTCAGGATGTGCCACAGCAATGGGGTCATGCACAGGGACCTCAAGCCCGAGAATTTCCTCTTCGCTAACAAGAAAGAGAATTCCGCTCTCAAGGCCATCGATTTCGGCCTCTCCGTCTTCTTCAAGCCAGGGGAGAGGTTTGTGGAGATTGTTGGGAGTCCTTACTATATGGCGCCAGAGGTTTTGAAGCGGAATTACGGGCCGGAGGTTGATGTGTGGAGTGCTGGGGTGATTCTTTATATTTTGTTGTGTGGTGTTCCTCCGTTTTGGGCAGAGACCGAGCAAGGTGTGGCTTTGGCGATCTTAAGAGGTGTGATTGACTTCAAGAGGGAACCTTGGCCACAGATATCGGAGAGTGCCAAGAGCCTTGTGCGGCGAATGTTGGAGCCGGATCCTAAAAAGCGCTTGACAGCGGAACAGGTGCTTGAACATCCCTGGCTGCAAAATGCAAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGTCAAGGCTTAAGCAGTTTTCTGTGATGAATAGATTCAAAAAGAAAGCTCTGCGGGTAATTGCAGAACATTTATCTGTTGAAGAGGTAGAAATAATCAAAGACATGTTTACATTGATGGATACTGACAAAGATGGCAGAGTAACATTTGAGGAACTGAAGGCTGGGTTGAGGAAGGTTGGTTCACAATTGGCTGAGCCGGAGATTAAGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTTGACTATGGAGAGTTTGTAGCTGTTACAATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAGCATTCAAGTTTTTTGACAAAGATGGGAGTGGGTATATTGAGTTAGGTGAGCTAGAGGAAGCATTAGCAGATGAGTCAGGAGAAACTGATGCTGATGTATTGAATGACATCATGCGGGAAGTTGACACTGACAAGGATGGTTGCATCAGTTATGAGGAGTTTGTGGCAATGATGAAAACTGGAACTGACTGGAGAAAAGCATCCAGGCAATATTCAAGGGAGAGATTCAAGAGTTTGAGCCTAAATTTGATGAAAGATGGCTCGCTTCAGCTTCATGATGAAATTACTGGTCAAGCTGTGGTGGTTTGA 1671 0.5033 MGNCNACAKADVVEDSTNNRNKKSNETNRGGRKKEQNQKKPNPFSDEPARSAAPIRVLKDVIPMSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAASVARTIAEVVRMCHSNGVMHRDLKPENFLFANKKENSALKAIDFGLSVFFKPGERFVEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISESAKSLVRRMLEPDPKKRLTAEQVLEHPWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKKALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVTFEELKAGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFKFFDKDGSGYIELGELEEALADESGETDADVLNDIMREVDTDKDGCISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLHDEITGQAVVV* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1465 556 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Gso4g1465 556 MobiDBLite consensus disorder prediction 1 52 - -
Gso4g1465 556 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Gso4g1465 556 ProSitePatterns EF-hand calcium-binding domain. 496 508 IPR018247 -
Gso4g1465 556 Gene3D Transferase(Phosphotransferase) domain 1 160 340 - -
Gso4g1465 556 PANTHER BNAA09G44420D PROTEIN 21 532 - -
Gso4g1465 556 CDD STKc_CAMK 73 331 - -
Gso4g1465 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 532 - -
Gso4g1465 556 SMART serkin_6 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1465 556 SMART efh_1 487 515 IPR002048 GO:0005509
Gso4g1465 556 SMART efh_1 451 479 IPR002048 GO:0005509
Gso4g1465 556 SMART efh_1 379 407 IPR002048 GO:0005509
Gso4g1465 556 SMART efh_1 415 443 IPR002048 GO:0005509
Gso4g1465 556 ProSitePatterns EF-hand calcium-binding domain. 460 472 IPR018247 -
Gso4g1465 556 ProSiteProfiles EF-hand calcium-binding domain profile. 411 446 IPR002048 GO:0005509
Gso4g1465 556 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Gso4g1465 556 MobiDBLite consensus disorder prediction 15 41 - -
Gso4g1465 556 SUPERFAMILY Protein kinase-like (PK-like) 56 357 IPR011009 -
Gso4g1465 556 Pfam EF-hand domain pair 380 439 IPR002048 GO:0005509
Gso4g1465 556 Pfam EF-hand domain pair 450 513 IPR002048 GO:0005509
Gso4g1465 556 ProSiteProfiles EF-hand calcium-binding domain profile. 483 518 IPR002048 GO:0005509
Gso4g1465 556 SUPERFAMILY EF-hand 360 539 IPR011992 -
Gso4g1465 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Gso4g1465 556 ProSitePatterns EF-hand calcium-binding domain. 424 436 IPR018247 -
Gso4g1465 556 Gene3D Phosphorylase Kinase; domain 1 75 159 - -
Gso4g1465 556 Gene3D - 341 516 - -
Gso4g1465 556 ProSiteProfiles EF-hand calcium-binding domain profile. 447 482 IPR002048 GO:0005509
Gso4g1465 556 ProSiteProfiles Protein kinase domain profile. 74 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1465 556 Pfam Protein kinase domain 76 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1465 556 CDD EFh 451 513 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1465 Gso-Chr4 43174979 43180076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1465 1 556 EF-hand Containing Proteins AT1G18890 82.374 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso4g1465 Pkinase 4e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1465 K13412 - gmx:100809838 1081.63