Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1463 ATGGGCATGGACTACTACAACATACTCAAAGTGAATCGCAACGCCAGCGACGACGATTTGAAGAAGGCTTACAAGAGACTCGCGCGTATATGGCACCCCGACAAGAATCCCGTCAACAACACCGAAGCGGAGGCCAAATTCAAACGAATCTCCGAAGCCTACGACGTTCTCAGCGACCCGCAGAAGCGCCAGATCTACGATCTCTACGGCGAAGAGGCACTCAAATCTGGGCAGTTTCCGCCGCCGCACTCCTCCTCCTCCTCGTCGTCCTCGCGCGCCTTCCACCACCGTCAGAACAACAACAACAACAACAACAACAAAAACAACAGCAACCCTCCCCCGGCCGCCTCGTCGTTCCGATTCAACCCGCGCGATGCCGACGACATCTACGCCGAGTTTTTCGGCCCGGAGGACATCGGCGCCGGCGGCCCCGACGCCTTCTTCCGGACCTCCAACGGCGGTGGCGCGTTCGGCGCCTCCGCTGCGGCGGGACGGAAGGCTGCCGCGGTGGAGAACGCGCTCCCGTGCAGCTTGGAGGACCTCTACAAAGGCGTCAAGAAGAAGATGAAGATTTCCAGGAACGTCTACGATGCCTTTGGCAAATGTCGGAACATGGAGGAGATTTTGACTATTGAGATAAAACCTGGCTGGAAGAAAGGAACAAAGATTACCTTCCCAGAGAAAGGTAACCATGAGCCTGGTGTCATCCCAGCAGATCTTATTTTTGTGATAGATGAGAAACCGCATGCTCTTTATAGAAGGGATGGTAATGATTTGGTGATCAACCAAGAGATAACCCTTCTTGAGGCCCTTACTGGTAAAACATTGGATCTCACCACCTTGGACGGAAGGAGTCTCATGATCCCATTGACAGATATTGTCAGACCTGGTGCTGAGGTTGTTGTCCCTAATGAAGGAATGCCTATATCAAAAGAGCCTGGGAGGAAGGGGAATTTGAGAATTAAGCTCGACGTCAAGTATCCTTCAAGGCTAACTCCAGAGCAGAAGTCTGATCTGAGAAGAGTTTTAGGTGGAATCTCATAA 1044 0.5259 MGMDYYNILKVNRNASDDDLKKAYKRLARIWHPDKNPVNNTEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPHSSSSSSSSRAFHHRQNNNNNNNNKNNSNPPPAASSFRFNPRDADDIYAEFFGPEDIGAGGPDAFFRTSNGGGAFGASAAAGRKAAAVENALPCSLEDLYKGVKKKMKISRNVYDAFGKCRNMEEILTIEIKPGWKKGTKITFPEKGNHEPGVIPADLIFVIDEKPHALYRRDGNDLVINQEITLLEALTGKTLDLTTLDGRSLMIPLTDIVRPGAEVVVPNEGMPISKEPGRKGNLRIKLDVKYPSRLTPEQKSDLRRVLGGIS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1463 347 MobiDBLite consensus disorder prediction 74 121 - -
Gso4g1463 347 CDD DnaJ 4 59 IPR001623 -
Gso4g1463 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 252 337 IPR008971 GO:0006457|GO:0051082
Gso4g1463 347 Gene3D DnaJ domain 2 143 IPR036869 -
Gso4g1463 347 MobiDBLite consensus disorder prediction 79 117 - -
Gso4g1463 347 Pfam DnaJ C terminal domain 171 328 IPR002939 -
Gso4g1463 347 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 346 - -
Gso4g1463 347 Pfam DnaJ domain 4 67 IPR001623 -
Gso4g1463 347 CDD DnaJ_C 174 331 - -
Gso4g1463 347 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gso4g1463 347 Gene3D - 249 329 - -
Gso4g1463 347 SUPERFAMILY Chaperone J-domain 3 86 IPR036869 -
Gso4g1463 347 PANTHER BNAA06G20720D PROTEIN 2 346 - -
Gso4g1463 347 Gene3D - 168 247 - -
Gso4g1463 347 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gso4g1463 347 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gso4g1463 347 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gso4g1463 347 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gso4g1463 347 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gso4g1463 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 173 249 IPR008971 GO:0006457|GO:0051082
Gso4g1463 347 SMART dnaj_3 3 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1463 Gso-Chr4 43136795 43142771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1463 5 74 C2H2 Transcription Factor Family AT1G74250 36.486 6.57e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1463 K09510 - gmx:100819472 622.083