Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1447 ATGGGGAAATCACCAGGAAAATGGATCAAGACCGTACTATTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGAAGAGAGGCACGAAGGGCATTTAGGGCCCTGAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAAACAAGCCGTTGTTACATTATGCTGCATGTATGGAATTGTAAAGTTACAAGCACTTGTCCGTGGAGGAAGGATTAGACAGTCTAATGAAATCCATGAGAAGTGCAATCTATTTAAGCCTCTGGATGCAAAACTTGGTGAGCCAGTTGGTATCTCCACAAAAATTTCAAAGCTGACTGCAAATACTTTCATCCATAAGCTTCTTGCTTCATCAATTACAATAATGGCACTGCAACTGCAATATGTTAATGGAGATCCAAATTCAGTCTTAAGTTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGAGACTCTAAATCTCAGAGAAAGCAGGGTAATGTTTCAAATGGGGAAGCTCAAATTACCAAGTCAAAACGCACTACCAGGAAGCTTCCTATTGCAAATTTTGAAACAGCCCTGGAGCAAACAAATCCTGAATTCGAGAAACCAAAACGTAATTTCAGGAAAACACCATACCAAGTGTCAGATCCAGAGCAAGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAGCTTGAGAAAGATTCATAACCCTGTTGTTGAGAATGCTGGTCAGCCAGAAGTTGAAAGTGAGACCCCCAAGCAGCATTTGGAAATGACGAAAGTTATTCCGGGTCACGCTGTTTTAGAACAAGCGACCATTACTTCTGATGATAAGATCAAGATGGAAGAAACTTCAACCATCTCGAATGTGCCTGATGTCGAAATCACTCCAATACCATCAGTCAACAAGGAAGTGTCTGAGATTCTAAACAATTATCAAGTGTCTGTAGAATCAAAGCCCTTGTCAGAGACTCCAACTAAAGATAGGAACACTTCTCATGACGAAGTTAAAAACAAGCTAGGCAACCTACCAGAGACTATTTTCAAAGATGAAAACTCCCTATTAACAAATGGAGATTTGAGTCATAGTGATCTGACAGGTAATGAAAACCAGAAACCTACCCGTAAAATCTCAAATTTGACAAAGCAGGAGAATGGAGAAGACGGCATAAAGAACAGTCCAAAATTACCAAGTTATATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCACAAGGGTCCCCAAGGTTTGGACAAGATGGGACTGAGAAAAACAACACTGCTGGTGGTTCTGGGAGGCATTCTCTGCCATCTTCAACTAACAACCAGATTAGTTCGCATTCACCTAAGCCACAGAGATCAGTTCCGGCAGGTGGCAAAGGGGGAAACAAAAGTGACAGAACAGTACCATCTTCTAAAGCAGGGAATGGGAAGGTAACTCAAGCTGAGTGGAGGAGGTAA 1494 0.417 MGKSPGKWIKTVLFGKKSSKSNISKGREARRAFRALKGIIRLQALIRGHLVRKQAVVTLCCMYGIVKLQALVRGGRIRQSNEIHEKCNLFKPLDAKLGEPVGISTKISKLTANTFIHKLLASSITIMALQLQYVNGDPNSVLSWLERWSASYFWKPVPQPKKIRDSKSQRKQGNVSNGEAQITKSKRTTRKLPIANFETALEQTNPEFEKPKRNFRKTPYQVSDPEQENPQSELEKVKRSLRKIHNPVVENAGQPEVESETPKQHLEMTKVIPGHAVLEQATITSDDKIKMEETSTISNVPDVEITPIPSVNKEVSEILNNYQVSVESKPLSETPTKDRNTSHDEVKNKLGNLPETIFKDENSLLTNGDLSHSDLTGNENQKPTRKISNLTKQENGEDGIKNSPKLPSYMAATESAKAKLRAQGSPRFGQDGTEKNNTAGGSGRHSLPSSTNNQISSHSPKPQRSVPAGGKGGNKSDRTVPSSKAGNGKVTQAEWRR* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1447 497 MobiDBLite consensus disorder prediction 170 203 - -
Gso4g1447 497 MobiDBLite consensus disorder prediction 325 497 - -
Gso4g1447 497 MobiDBLite consensus disorder prediction 359 397 - -
Gso4g1447 497 Pfam Protein of unknown function (DUF4005) 393 476 IPR025064 -
Gso4g1447 497 PANTHER PROTEIN IQ-DOMAIN 31 29 485 - -
Gso4g1447 497 MobiDBLite consensus disorder prediction 429 463 - -
Gso4g1447 497 PANTHER IQ-DOMAIN 5-RELATED 29 485 - -
Gso4g1447 497 MobiDBLite consensus disorder prediction 332 350 - -
Gso4g1447 497 Pfam IQ calmodulin-binding motif 37 54 IPR000048 GO:0005515
Gso4g1447 497 ProSiteProfiles IQ motif profile. 37 59 IPR000048 GO:0005515
Gso4g1447 497 MobiDBLite consensus disorder prediction 205 219 - -
Gso4g1447 497 MobiDBLite consensus disorder prediction 159 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1447 Gso-Chr4 42671089 42678030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1447 25 497 IQD Protein Family AT1G74690 45.709 1.65e-104 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1447 - - gmx:100814860 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1447 4 42671089 42678030 Gso6g1608 6 16851386 16858013 GST