Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1445 ATGGAAAATGGAAACACAGCCAACGAACCCGCAAGCTTCTGGACTCAAGCAAACGCTCTTCTTAGGAAGAATTTAACCTTTCAGAAACGAAATGTTAAAACAAACGTTGGACTCATCCTGTCCCCGTTCATTTTGTGTCTCTTGCTGGTTCTGCTCCAAAGGTTGCTGGAGTACCAATTGGACAAGGCTGAGAACAAGTGTGGCTGCGTTTGTGTTAGGAGACAAGGGGACACGTGTCTCGAGGAGGAGTGCGGCATTGAGCATTCGGATTTGGACCAGTTTGCCACGTGTCCTATTCCCAGCCCTCCAGAGTGGCCTCCTCTGCTGCAAGTTCCCGCACCACAGTACCGCGCTGTGAGAACGGATTATTTCCCCTTTTCTGATTTTCCAAACACGTCCTGCAGGAAGAATGGCTCTTGCCCTGTCACTATGCTCTTCACTGGCACTAACCAATCTTTTGGAGAAATCATATCTAGGAATATGATTCCAAGTACCTTGAGTACTATATACAGCTCTGATATTATGGCTAGTTTGGCATCAAATGTAGTGGGATCAGAATCAGAGCCAGGGAACACCAATTTTCTGGAACCTGCTTTCTTTTCGGACCTTCCTATTTATTATCTACAGAATCAGTGCACGCAGAACTCTACATTCTCCGTTTCTGTTCAGATGTCAGGGATTAGCAAGCAGCAAGAGGTAATATGTGCTCAGGGTTTACGTTTATGGCGTAATAGTTCTTCTGAGGTGAACAATGAGCTATATAAAGGTTATTGGAGAAGTAACATAGAGAGACAGATCAATGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATGGGAGTATATTTAACGTCAGCATATGGTACAACTCAACCTACAAAAAGGACACTGGCTTTAATCCAATTGCATTGGCGCGTATTCCTCGTTCTGTAAATTTGGTATCAAATGCGTACCTTCAGTTTCTGTTGGGACCTGGTACCAAAATGTTTTTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCCAATTAAATTGGATTTGGCTTCTCTTTTGGGTGGTGTCTTCTTTACATGGGTCATCTTGCAACTTTTCCCTATTCCCTTGACATCGCTAGTATATGAGAAGCAACAAAAGTTAAGAATCATGATGAAAATGCATGGTCTTGATGACGGGCCATATTGGATGATTTCGTATGGTTATTTTCTTGCCATATCCATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGGTTGAATTTCTTCACAATGAATGACTACAGCATCCAATCCGTGTTTTATTTCATCTATATAAATTTACAAATTTCACTGGCTTTTTTATTGGCTTCCCTGTTTTCAAATGTTAAAACTGCTACAGTACTTGCATATATAGGTATGTTTGGAACTGGGCTATTAGCTGACTTTCCTTTCCATTTTTTTGTTCAAGACACATCATTTCCAAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGTTTTGCTTTATATCGTGGGCTATATGAGTTTTCGCAATATGCCTTTAGTGGGGATGCTTTGGGGACCGATGGTATGCGCTGGAGTGATCTGAGTGATAGCACAAATGGCATGAAGGAGGTCTTAATTATCATGTTTGTGGAGTGGCTATTGGTGCTTTTGTTTGCTTATTATATCGATCAAGTTTTGTCTTCAGGATGCAGGAAAAGTCCTCTTTTCTTGAAAAGATTTCAGAAAAAGCCCCATTCATCTTTTCGGAAGCCTAGTATCCAAAGGCAGAAATCTAAGGTTTTTGTTCAGATAGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGGAACTGCTACTTGAATCGACTATTAATCAAGCAATTGTATGCGACAACATGAGAAAGGTCTATCCGGGGAGGGATGGCAACCCGGAGAAACTTGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACCAAGCCAACCTCTGGTACCGCATATGTTCAAGGTCTTGACTTAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAATCCCTAACCGGAAGAGAGCACCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTAACCCAAGCAGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTCACGGAGGAGTTGCTGATAAGCAAGCTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTCGCAATTTCGTTGATTGGAGATCCTAAAGTGGTTTATATGGACGAGCCAAGTACTGGACTTGACCCTGCATCAAGAAAAAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAAGCAGAAGTCCTATGTGATCGATTAGGAATATTTGTAGACGGTGGCTTGCAGTGCATAGGAAATCCGAAGGAGTTGAAAGCCAGGTATGGAGGAACATATGTCTTCACAATGACAACATCTATTGATCATGAAAATGATGTAGAGAATTTGGTGCGACAGCTCTTCCCAAATGCTAACAAGATCTACCATATCTCTGGCACCCAAAAATTCGAGCTACCAAAGGATGAGGTTAAAATAGCAAATGTATTCCAAGCTGTAGAAACCGCAAAGAGAAGCTTCACCGTTTCAGCGTGGGGTTTAGCTGATACCACATTGGAAGATGTCTTCATTAAAGTTGCACGTGGGGCTCAGGCATTTAACACCTTGTCATAA 2850 0.42 MENGNTANEPASFWTQANALLRKNLTFQKRNVKTNVGLILSPFILCLLLVLLQRLLEYQLDKAENKCGCVCVRRQGDTCLEEECGIEHSDLDQFATCPIPSPPEWPPLLQVPAPQYRAVRTDYFPFSDFPNTSCRKNGSCPVTMLFTGTNQSFGEIISRNMIPSTLSTIYSSDIMASLASNVVGSESEPGNTNFLEPAFFSDLPIYYLQNQCTQNSTFSVSVQMSGISKQQEVICAQGLRLWRNSSSEVNNELYKGYWRSNIERQINEIAAGYDFLNSNGSIFNVSIWYNSTYKKDTGFNPIALARIPRSVNLVSNAYLQFLLGPGTKMFFEFVKEMPKPETPIKLDLASLLGGVFFTWVILQLFPIPLTSLVYEKQQKLRIMMKMHGLDDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQSVFYFIYINLQISLAFLLASLFSNVKTATVLAYIGMFGTGLLADFPFHFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYAFSGDALGTDGMRWSDLSDSTNGMKEVLIIMFVEWLLVLLFAYYIDQVLSSGCRKSPLFLKRFQKKPHSSFRKPSIQRQKSKVFVQIEKPDVTQEREKVEELLLESTINQAIVCDNMRKVYPGRDGNPEKLAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAYVQGLDLRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGGLQCIGNPKELKARYGGTYVFTMTTSIDHENDVENLVRQLFPNANKIYHISGTQKFELPKDEVKIANVFQAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFNTLS* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1445 949 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 949 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gso4g1445 949 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 949 - -
Gso4g1445 949 Pfam ABC-2 family transporter protein 347 559 - -
Gso4g1445 949 CDD ABC_subfamily_A 631 852 - -
Gso4g1445 949 SMART AAA_5 657 841 IPR003593 -
Gso4g1445 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 855 IPR027417 -
Gso4g1445 949 Pfam ABC transporter 649 793 IPR003439 GO:0005524
Gso4g1445 949 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Gso4g1445 949 Gene3D - 617 886 IPR027417 -
Gso4g1445 949 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 864 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1445 Gso-Chr4 42640667 42648714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1445 603 851 Calmodulin-binding Proteins AT2G36910 23.462 5.37e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1445 - - gmx:100805474 1748.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1445 4 42640667 42648714 Gso6g1610 6 16875753 16885483 GST