Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1435 ATGCCTGGCCAGAGAAACTCCAGAACTTCAAAATTCACAGAAAGTGAGATTAATGATCTGATGTTGAGGCTACAAGCACTGCTACCACAACTAAACCAAACAAGCAACTCAAGGGCATCATCAGTAAGCGTGATGAAGATCATGAAGGAAACTTGCTCTCACATCACAAGGCTACAGAAAGAGGTGAAAGACCTTGGTGAAAGGCTAGTACAGCTGATGGATTCTGTAGACCTTAGTGATATTGACGAGGAACGTTTTACAAGACTTCTGCAACAATAA 279 0.4194 MPGQRNSRTSKFTESEINDLMLRLQALLPQLNQTSNSRASSVSVMKIMKETCSHITRLQKEVKDLGERLVQLMDSVDLSDIDEERFTRLLQQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1435 92 Coils Coil 55 75 - -
Gso4g1435 92 Gene3D - 4 85 IPR036638 GO:0046983
Gso4g1435 92 PANTHER DNA BINDING PROTEIN 1 92 IPR044172 -
Gso4g1435 92 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 74 IPR036638 GO:0046983
Gso4g1435 92 PANTHER DNA BINDING PROTEIN 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1435 Gso-Chr4 42244125 42245332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1435 5 77 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 47.945 7.44e-17 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1435 - - gmx:100790746 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1435 4 42244125 42245332 Gso6g1619 6 17023862 17025196 GST