Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1428 ATGAGCAAGAAGGGCCCTCTCTATGTTGCAATGTTTAAGCCAATTGGAATCATCTTTGCGGTCATCATGGGAATTGCCTTTCTTGGTGACTCTATCTATCTTGGAAGTGTGCTTGGAGCAGCCATAGCGGTTATTGGTTTTTATGCTGTTATTTGGGGGAAAAGCCAAGAGCAAGCAAAGGAAGAGTGTGAAGTCTATGATGACTCGGAATCATACTCGCCCGTTGTCCCTCTTTTGGAGAACAAGAGAATGGAGGAATAG 261 0.4444 MSKKGPLYVAMFKPIGIIFAVIMGIAFLGDSIYLGSVLGAAIAVIGFYAVIWGKSQEQAKEECEVYDDSESYSPVVPLLENKRMEE* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1428 86 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 55 - -
Gso4g1428 86 PANTHER WAT1-RELATED PROTEIN 2 71 - -
Gso4g1428 86 PANTHER WAT1-RELATED PROTEIN 2 71 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1428 Gso-Chr4 42147209 42148052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1428 4 86 Nodulin-like Gene Family AT3G28050 49.462 1.86e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1428 - - gmx:100781718 169.474