Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1395 ATGGAGTCTGGTGATGAGATTAATTTGAACATAGAAAGTGGGAATAATGGGAAGAGTGGTGGTGATGGGTTCGTTGATAGGAGTAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAAGAGTTCTCATGAGGTTTTCACGCTTCTTTTGAGATGTTCTTATCAGGTTACCTCGGTAAAGTCGGCAAGACAGGTAATTGATGCACTGAATGCGGAGGGGCAACATATAGATATCATACTGGCTGAGCTTGACCTTCCGATGAAGAAGGGCATGAAGATGTTGAAGTACATAGCACAGGATAAAGAGTTTCGCCGAATCCCTGTTATAATGATGTCCGCACAAGATGAGGTATCCGTTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGACGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTATGATTTTGATCTGGTAGTATCTGACCCGAGTGATGCCAACACAAACAGCACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCACTAATCCTGAGTCTACTATTGCAATTGCTGCTGCTGTTGAGGAACCTCCAGATGCTCATGCATCAGAATGCGGGCCTGATGTGGATGGAGTTAATGATCACCAAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTCTTCACGTATGTTAAAGCATCAATACTTAAGAGCAACTTGGAAGGGGTTGTTAATGTAGACAAAAATGGTGCTACACATGTGAGGATGGAAGTTATGCATCAAACATGTGCTCAACAAGGGGTGAATGACCTTCAAATACGGGAAAATGGAGAGGCATATGAAAGTCAATCGCAAGATGACTTACCCAGCAGCACTAGTATACCTGATTCTTTGTCTATTGAGAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACAGCAAAAGCACTACAGGGAAGAAAATTTACATCAGGGTGTGATGCATCCAAGAAATGGGACTCATTGTTCCGAGCTTGAAGTATCTGGCATGGCTTCCCAACAGGTTTATCCATATTATATTTCAGGGGTTGTTAATCATGTTATGATGCCTTCATCAGCACAAATGTATCATCAAAAGAATATCCAGGACCTACAGAATCATCCTAGCTCAGCTATGATTTCACAGTACAGCCATCTTCCCCAAGGTGGTCCTCATGGAACGGGGATGACATCCTTCCCATATTACCCAATGAGCATATGCTTACAACCTGGTCAGATTCCTAATCCTCATTCATGGCAATCATTTGGAAACTCAAGTTCATCTGAAGCAAAATTAAGTAAAGTTGATAGGAGAGAAGCAGCATTGATGAAGTTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTTAACCGGAAACGACTTGCGGAAAGGCGGCCTCGTGTGAGGGGTCAGTTTGTCAGAAAGTTGAAGGGTGCTAATGCGGATCTTAATGGGCAGCCTGCATCGATTGACTATGACGAAGATGACGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCCGAGGATGCTTGA 1653 0.4338 MESGDEINLNIESGNNGKSGGDGFVDRSKVRILLCDNDSKSSHEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSTNPESTIAIAAAVEEPPDAHASECGPDVDGVNDHQTAHFSSGPKKSELRIGESSAFFTYVKASILKSNLEGVVNVDKNGATHVRMEVMHQTCAQQGVNDLQIRENGEAYESQSQDDLPSSTSIPDSLSIERSCTPPASMEVSQQKHYREENLHQGVMHPRNGTHCSELEVSGMASQQVYPYYISGVVNHVMMPSSAQMYHQKNIQDLQNHPSSAMISQYSHLPQGGPHGTGMTSFPYYPMSICLQPGQIPNPHSWQSFGNSSSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLKGANADLNGQPASIDYDEDDEEDEDDQGARDSSPEDA* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1395 550 SUPERFAMILY CheY-like 28 156 IPR011006 -
Gso4g1395 550 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 533 IPR045279 GO:0009736
Gso4g1395 550 MobiDBLite consensus disorder prediction 303 322 - -
Gso4g1395 550 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 8 533 - -
Gso4g1395 550 MobiDBLite consensus disorder prediction 526 550 - -
Gso4g1395 550 Pfam CCT motif 470 512 IPR010402 GO:0005515
Gso4g1395 550 Pfam Response regulator receiver domain 32 143 IPR001789 GO:0000160
Gso4g1395 550 ProSiteProfiles Response regulatory domain profile. 31 149 IPR001789 GO:0000160
Gso4g1395 550 MobiDBLite consensus disorder prediction 512 550 - -
Gso4g1395 550 SMART REC_2 30 145 IPR001789 GO:0000160
Gso4g1395 550 Gene3D - 30 237 - -
Gso4g1395 550 ProSiteProfiles CCT domain profile. 470 512 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1395 Gso-Chr4 41077782 41083543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1395 20 549 Response Regulator Gene Family AT5G61380 50.159 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gso4g1395 Response_reg 3.2e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1395 K12127 - gmx:100799728 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1395 4 41077782 41083543 Gso6g1657 6 17638436 17644601 GST