Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1390 ATGGCTCTCTTCCGAAGATTCTTTTACCGGAAACCACCGGATCACCTCCTCGAGATCTCCGACAGACTCTATGTTTTTGATTGTTGCTTCTCCAAGAATGTGTTGGAGGAAGAGGAGTACAAGGCTTATATTGGGGGGATAGTGGCTCAGCTGCAGGATCACTATCCGGATGCTTCTTTCATGGTGCTCAATTTCAGAGAAGGAGATAGGCGCAGTCGAATTTCAGACATTATGTCTCAGTATGAGATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCACTTTTGCCTTTGGAGATGATTCACCACTTCCTTCGGTCAAGCGAGAGTTGGCTGTCTTTGGAGGGGCAACAAAACGTGCTTTTGATGCACTGTGAAAGAGGCGGATGGCCTGTGCTCGCATTTATGCTAGCTGGTCTTCTATTGTACAGGAAACAATACAATGGGGAACACAAGACTCTTGAAATGGTGTACAAGCAAGCACCTAGAGAACTTGTCCACCTTTTATCTCCTTTGAATTCACAACCTTCTCATTTGAGATATCTTCAGTACATTTCCAGGAGGCATTTGGGTTCCGTGTGGCCTCCACCAGATACACCCTTATATTTGGATTGCCTCATTCTTAGAGTCCTTCCATTATTTGATAGTGGAAAAGGTTGCAGGCCGGTTGTGCGTGTCTACGGTCCAGACCCTTCAAAACCTTCCAACAGAAGTTCTAAGCTTCTTTTCTCAACTTCAATGACCCCAAATCATGTTCGCCACTACCAGCAGGCAGAATGTATGCTCGTGAAAATTGACATCCATTGTCATGTTCAAGGAGATGTGGTTCTTGAGTGCATACATTTAGGTGAAGATTTTGTTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCGTTTGTACAGTCAAATATACTGATGCTGAGGCATGATGAAATTGATATTCTGTGGGATGCAAAGGATCAGTTCCCCAAGGACTTCAAATTAGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTAATCTAACCACATTCAATGTGAGTGGAGATGCAAATGACACAGAATGTGCTTCACCTGAGGCTGAGGAATTCTATGAAGCAGAAGAGATCTTCAGCAATGTAATTGATGCACAGGAAGGTAAGGGGGATTACGATTCTCCAATGGTTATTAATGATGGAAGTCATAAAGAGCTCTGGAAAGAGTATTCAGATCCTCATACTTTTCAGGATTCTGTGTTAGATGATGGAATTCACCAACAGCTTGATTATGTGAAGTACCAGCTTGACAAGAGGGTGGTTTCAGATACTCATGCTGTGAAAGATATTGGTGTGGATTATGGAGTCACTTTTATGACAAAGGAAGTCAGTGTGGATGTGCATGATGAGTTGTCAGTTATACAAAACAAGTATGATGAAGATAACATTGAAAAGAAACAACTTCCTTCAAACTCAAAGCCAGTGGGAGATACAGCTGTAGCAAAGCAAAAGACTAAACACCAAGAACCACTTGGTTTTCTGGCAAAACACGCAAAACCCGATGCAACAACTAGGTGGATTCCTTCTAATAAGGGTTCTTATCAAGATTCAATGCATGTCTCATATCCACCATCAAGGAATATTAATTCAGCGGCTACTCCGTCAAATGTTACCTCTGCAAAAGATAAAATCACTGATGCCAAAGGAAAATCTACTTCTGGTTCTCATGTCGCTGCAGTAATTGTTTCTATGGACATGGCAAATGACCTGAAAAGTTGTACAGGGGATAACTCAAAATCTTCAGGCAGCATAGCTGAAGTAGACTCAAACTCTTCACCACCATCATTACTGTCAGTCAAAGAGACGTCTCTTCAGTCAGAGACTCAAACACCACAACAGAGCTACAATCAAATGTTACAACTTCATCCTCCACCTCCTCCTCTGCCTCCATTTTTTGGGAAAAATAGAGGGAGCTTCATAACTCCTACCCAATGGAAATCTTTTTATCCATCCATTGCCATAGTTGGACAAAATAGTGGTGCTTTAGCTCCTCCTTCCCTGGCTCCTTCCATTGCAAGTGGTGCAACTACATCAAAAGTTTCTGAATTACTTGATGCAGTTTCTGTTTCCTGTCCTCCACCATCACAACCACCACCACCACTTCCTCCTCCTCCTCCTCCTCCTATGTCGTCTACAATTAGAGCTCCAGTGCCTCCTCCTTCAATATCTCCAACATCATTTAAAACTCCACCTCCAGCACCCCCACTGCCACATCCACCTTCACCTCCTTTAAGTAAATCTACACCACTGCCTCCTCCTCCTTTAAGTACTGCTCCACCACCACCTCCTCCTCCTCCTTTAAGTACTGCTCCTCCACCACCACCTCTTCCTCCATCAAGTGGAGTGCCACCTCCTTCATTGTCTAGAGCCCCACCTCCCCTGCCTCCACCAACTTGTGGACCACCACCACCTTCAATGCATGGAGGCACACCTCCTCCACCACCTCCAAGTGGTCGAGGCCCACCTCCTACTGGATATCGGGCTCCTGCTGCTCCTGCTCCTTTTGGATCTCTAGGTGGGGCTCCTTCTCCATCACCACCTGGAACTGATCCAAGAGGGAGAGGGCGTGGACTTACACGTCCTACGGGAGCTGGTGCCATGGCAGCTCGGCAGTCCTCCTTAAAGCCTCTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGATGAATTACAAAGACGTGGAGACCCTCTAATAACACAAGAGTTTGACGTTTCAGAGATAGAGAAGCTTTTTTCTGCAAATGTTCCAAAACCTGCTGATTCAGATGGTAAATCTGGAGGGCGACGCAAATCTGTTGGATCCAAAACTGACAAAATCCACTTGATTGACCTTAGGAGGGCCAATAATACTGAAATTATGCTCACGAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGATTCGGTGTTAGATGTCGATCAGTTGGAAAATCTCATTAAATTTTGTCCTACCAAAGAGGAGATAGAGCTTTTAAAGGGATACACCGGTGATAAGGAGAATTTGGGGAGGTGTGAAAAGTATTTTTTGGAGCTGATGAAAGTGCCAAGAGTGGAGTCAAAATTCAGAGTATTCTCTTTCAAGATTCAGTTTAGGACTCAGATTACAGAGTTTAAGAAGAGTTTAAACACAGTGAACGCTGCCTGTGAAGAGGTCCGAAACTCGTTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAACAAGGGGAGCTGCTGTTGGATTCAAGTTAGATAGTCTTTTAAAACTAACCGAAACTCGTGCTTCAAACAGTAAAATGACACTAATGCATTTTCTTTGCAAGGTCCTAGCTGACAGGTTTCCCGGACTCCTTGATTTTCACCTTGACCTTGTAAACCTGGAAGCAGCCACTAAGATACAATTGAAATCATTAGCAGAAGAAATGCAGGCAATCATCAGGGGATTAGAAAAGGTTAAACAGGAGCTTGTTGCATCTAAAAATGATGGCCCCGTGTCTGAAGTTTTTCGTAAGACATTGAAGGAATTCATTGCTGTTGCAGAGTCAGAGGTGGTATCTGTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCCCTATATTTTGGTGAGGATCCTTCCCGTTGTCCTTTTGAGCAAGTTACTGCAACTCTCTTCAATTTTACAAGGTTGTTTCTGAAAGCACATGAACAGAATTGCAAGCAAGCGGAGTTAGAGAAAAAGAAAGTGGAGAAAGAGGCTGAAATGGAGAAGGCTAAAGGCATTAACTTGATAAGGAGGAGTGGGAAATATGAAGAAGAAGAAAGCTGA 3900 0.4362 MALFRRFFYRKPPDHLLEISDRLYVFDCCFSKNVLEEEEYKAYIGGIVAQLQDHYPDASFMVLNFREGDRRSRISDIMSQYEMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEHKTLEMVYKQAPRELVHLLSPLNSQPSHLRYLQYISRRHLGSVWPPPDTPLYLDCLILRVLPLFDSGKGCRPVVRVYGPDPSKPSNRSSKLLFSTSMTPNHVRHYQQAECMLVKIDIHCHVQGDVVLECIHLGEDFVREEMMFRVMFHTAFVQSNILMLRHDEIDILWDAKDQFPKDFKLEVLFLDADAVIPNLTTFNVSGDANDTECASPEAEEFYEAEEIFSNVIDAQEGKGDYDSPMVINDGSHKELWKEYSDPHTFQDSVLDDGIHQQLDYVKYQLDKRVVSDTHAVKDIGVDYGVTFMTKEVSVDVHDELSVIQNKYDEDNIEKKQLPSNSKPVGDTAVAKQKTKHQEPLGFLAKHAKPDATTRWIPSNKGSYQDSMHVSYPPSRNINSAATPSNVTSAKDKITDAKGKSTSGSHVAAVIVSMDMANDLKSCTGDNSKSSGSIAEVDSNSSPPSLLSVKETSLQSETQTPQQSYNQMLQLHPPPPPLPPFFGKNRGSFITPTQWKSFYPSIAIVGQNSGALAPPSLAPSIASGATTSKVSELLDAVSVSCPPPSQPPPPLPPPPPPPMSSTIRAPVPPPSISPTSFKTPPPAPPLPHPPSPPLSKSTPLPPPPLSTAPPPPPPPPLSTAPPPPPLPPSSGVPPPSLSRAPPPLPPPTCGPPPPSMHGGTPPPPPPSGRGPPPTGYRAPAAPAPFGSLGGAPSPSPPGTDPRGRGRGLTRPTGAGAMAARQSSLKPLHWSKVTRALQGSLWDELQRRGDPLITQEFDVSEIEKLFSANVPKPADSDGKSGGRRKSVGSKTDKIHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDDSVLDVDQLENLIKFCPTKEEIELLKGYTGDKENLGRCEKYFLELMKVPRVESKFRVFSFKIQFRTQITEFKKSLNTVNAACEEVRNSFKLKEIMKKILYLGNTLNQGTTRGAAVGFKLDSLLKLTETRASNSKMTLMHFLCKVLADRFPGLLDFHLDLVNLEAATKIQLKSLAEEMQAIIRGLEKVKQELVASKNDGPVSEVFRKTLKEFIAVAESEVVSVTNLYSVVGRNADALALYFGEDPSRCPFEQVTATLFNFTRLFLKAHEQNCKQAELEKKKVEKEAEMEKAKGINLIRRSGKYEEEES* 1300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1390 1299 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Gso4g1390 1299 PANTHER FORMIN-J 1 1284 - -
Gso4g1390 1299 MobiDBLite consensus disorder prediction 588 644 - -
Gso4g1390 1299 Gene3D - 203 336 - -
Gso4g1390 1299 SMART PTEN_C2_2 198 338 IPR014020 -
Gso4g1390 1299 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Gso4g1390 1299 MobiDBLite consensus disorder prediction 704 888 - -
Gso4g1390 1299 Gene3D Formin, FH2 domain 881 1267 IPR042201 -
Gso4g1390 1299 Coils Coil 1162 1182 - -
Gso4g1390 1299 SUPERFAMILY Formin homology 2 domain (FH2 domain) 957 1283 - -
Gso4g1390 1299 ProSiteProfiles Formin homology-2 (FH2) domain profile. 880 1281 IPR015425 -
Gso4g1390 1299 MobiDBLite consensus disorder prediction 483 503 - -
Gso4g1390 1299 Coils Coil 1256 1285 - -
Gso4g1390 1299 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gso4g1390 1299 CDD PTP_PTEN-like 16 190 - -
Gso4g1390 1299 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Gso4g1390 1299 MobiDBLite consensus disorder prediction 707 845 - -
Gso4g1390 1299 MobiDBLite consensus disorder prediction 934 954 - -
Gso4g1390 1299 Gene3D Protein tyrosine phosphatase superfamily 13 201 IPR029021 -
Gso4g1390 1299 Pfam Formin Homology 2 Domain 886 1255 IPR015425 -
Gso4g1390 1299 SMART it6_source 880 1299 IPR015425 -
Gso4g1390 1299 MobiDBLite consensus disorder prediction 588 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1390 Gso-Chr4 40895826 40921175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1390 1 556 FH2 protein (formin) Gene Family AT5G07740 59.900 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1390 - - gmx:100815561 1406.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1390 4 40895826 40921175 Gso6g1664 6 17760952 17775385 GST