Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1358 ATGGAGGAACATAAATCTGTTATCTCCACCTGTGAACAAGATCAACATGTGGTTGCTGCCGCTCAGCACATTTTGAAGGCACTAGCAGCAAGTAAGACTGTATCTGATGACTTGAGAAAAACCCTTTTGGATATTGAGACACAATTGTCTTCAATTTCCATAGTCAATGAGAGAAAAGGAAGAGAAATCAAGCATTTAGAGAGGCAGCTTAAGTGTGTTGAAGACAAGGTAATGAGGTGGGAGGCAAACCCTTCCAACGAGTCTTCTGAGTATTTGAAAGTTGTTGGTGAAATCCAAGTACTGATTCAGAATTTGGAAAGCTTTTCTGTGAATGAAAAGTGGAAGCAGAAGGAACTTGTTCGGAGAGCAAACGAAATTCTGCAGGTTGCTATGTCAAGGCTTGAGAAAGAGTTGGTCCACATTCTTCTCCAACATAAGCAACACTTAGAGCCTGAATACCTGTATTTCCATTTTAATAGGGTGGATATGGTGTTTGATGAATCGTTTCGTTCGGTTGAGGATGAACAAATCGACGAGGCCTCCCGGAGTAGCGGTGCTAGCCAATCCGAGGCCAGCACTGTTGATTTGGTGAATCCAGCAGTGCTTGAACGTCTCAAGAGCATTGCAAGTGTCATGTTTGCTTCAAAATACCATCAGGAATTCTGTCAGGTCTTTGTTACATCGAGGAGGGATGCCTTGGCCGAGTATTTTGTCATTCTTGAGATGGAAAAGTTAAGAATTGAGGATGTGCTAAAACTGGAGTGGCATTGCTTGAACCATGAGATAAGGAAATGGGTTCGAGCCATGAAGATCATTGTTCGGGTGTACCTTGTCAGCGAGAAACGATTATGTAAGCAGGTTCTTGGTGACTTTGGATCCTTTTATCAATGTTGCTTTTCTGAAATTTCTCAGAGTTTTATGCTGCACCTCTTGAATTTTGGTGAGGCCGTGGCAATGGGAATGCACACACCAGAAAAAATGTTTCGTTTACTTGACATGTATGAGGTTTTGGAGAAACTTGGTGTGGACGTAGATGTTTTGTTCTTTGAAGAAGTTGGTTCTTTTGTAAGAGGAGAGTTTCACAAGCTTCTAAGGAGCTTTGGTGACACTATTAAGTCTACACTTCTGGCATTCAGAAATGCTATTGCATCCAATCATTCAAAGACCCCTTTTCCTCAAGGGGGTGTTCATCATGTTACCAAGTATGTCATGAATTACATCATGGCTCTAGTTGAATATGGTGACACCCTTAATCTCCTTCTTGTTGATGACACCTCAATTGATCCTGCAGGCAACAAAGATGACACACCATGTCTCTCATTGTGTCCAGTGGCTTGCCAATTTCGGTCAATCACCGCAACTCTAGAATCCAACTTGAGCAACAAGTCCAAGTTATACAAAGACGAGGCTTTGCAACATATTTTCATGATGAACAACATTCATTACATGGTGCAAAAGGTCAAGTGCTCTGATCTAAGCCATTTCTTTGGGGACTGTTGGCTTCGCCAGCACATTGCGATGTATCAGCGCGACGCAAGGTGTTACGAGAGGATCTCTTGGGGCTCGGTGCTTTCCATGCTCAAGGAGGGTAGTGTGTCAAATTGTGTCTCACAGAGAACTTTGGAGAAAAGATGCAAAGAGTTCAGCACTGCCTTTGGTGAAGTTTACAGGATCCAGACAGGGTGGTTCATCCTAGACCCTCGACTTCGCGAGGATCTACAAATTTCAGTGTCTCAAAAACTGGTTCTTGCATACAGAACATACATTGGTAGAAACTCATCTAGCATTGCTGAGAAGTATGTCAAGTACACTGAAGATGATCTTCAAAGTTACATTTTGGACCTTTTTCAAGGGTCACCAAAATCTTTGCACTATCCTCAGCACAGAAAGTGA 1893 0.4253 MEEHKSVISTCEQDQHVVAAAQHILKALAASKTVSDDLRKTLLDIETQLSSISIVNERKGREIKHLERQLKCVEDKVMRWEANPSNESSEYLKVVGEIQVLIQNLESFSVNEKWKQKELVRRANEILQVAMSRLEKELVHILLQHKQHLEPEYLYFHFNRVDMVFDESFRSVEDEQIDEASRSSGASQSEASTVDLVNPAVLERLKSIASVMFASKYHQEFCQVFVTSRRDALAEYFVILEMEKLRIEDVLKLEWHCLNHEIRKWVRAMKIIVRVYLVSEKRLCKQVLGDFGSFYQCCFSEISQSFMLHLLNFGEAVAMGMHTPEKMFRLLDMYEVLEKLGVDVDVLFFEEVGSFVRGEFHKLLRSFGDTIKSTLLAFRNAIASNHSKTPFPQGGVHHVTKYVMNYIMALVEYGDTLNLLLVDDTSIDPAGNKDDTPCLSLCPVACQFRSITATLESNLSNKSKLYKDEALQHIFMMNNIHYMVQKVKCSDLSHFFGDCWLRQHIAMYQRDARCYERISWGSVLSMLKEGSVSNCVSQRTLEKRCKEFSTAFGEVYRIQTGWFILDPRLREDLQISVSQKLVLAYRTYIGRNSSSIAEKYVKYTEDDLQSYILDLFQGSPKSLHYPQHRK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1358 630 Pfam Exo70 exocyst complex subunit 264 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso4g1358 630 Coils Coil 56 83 - -
Gso4g1358 630 Gene3D Exocyst complex component Exo70 68 625 - -
Gso4g1358 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 623 IPR004140 GO:0000145|GO:0006887
Gso4g1358 630 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 23 623 - -
Gso4g1358 630 SUPERFAMILY Cullin repeat-like 81 616 IPR016159 -
Gso4g1358 630 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1358 Gso-Chr4 39531585 39534301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1358 1 617 EXO70 exocyst subunit family AT5G61010 43.582 5.68e-176 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1358 K07195 - gmx:100791622 1243.41