Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1351 ATGGCAGCAAAGCTCCTGCATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGCCACCATGTTCTCACGGCTCGCCGCATTAGCCAGAAGAGGCTTGCTTCTGGTATTCAACATAGTAATTCTCCCTTCAGTGAGGGCAGCTTGGAAAGAGATTCTGATATCATACTCCATCAACAAACAGCAACTGATACTAGCTTAAACAAGGGTGTGAATGAAAGGCAAAGAATTTCTACCGAATCATCAAGAGCATCATTCTCTTCTTGTTCATCATCGGTGTCCTCTCTGGACTGCAAGGCTGAAGCAGAGGCTCCATATGACCGGATTCTTTTTCCTGAAACTCCTTCAAGGGATGCAGTTATGAACCAATCTACCATCTCTCCCCATTTTGGATGTAACTCCCTTGATCTGAGGGATGTGGTGAAAGATTCAATGTATAGGGAAGCTCGAGGACTGTCATTGAAGACTACAGCCAAAGAGGAATCTGCCATTAATGCCACAAAGCACAGGGATTCACCGCGACCTATTCAGTTGTCCAAATCTGTTGATGGATCTTACAGAGTTGGAATAGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCCATCCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAAAGAACTTCCGAGATCATCACATGAAGTAAAAGATGGACACTGGCATTCCATCTCAAAGGGTGCTCCTTGGTTTCCTTATGAAGGTAAAGAAATAAGCCGTTTATCTTTTGAATCGCGAGAAACCATCAAATCCACACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAGGAAGGTTCATTGCGCAGTTACAGCACTGACTCAAAAGCCACTCACCACTCAAGAAACATTTACAGTGGCACCTCCACCTCAAATGACAAATTCCCTACCCTACAACAGCCTTCAGCAACCCCAAGTCGTCCACCTAGTGTTGTGGCAAAATTAATGGGCTTGGAAGCTTTACCGGATTCCTCTTTGGCTGGTGATGGTCAGTCAAGTTCAACTGAAACTTACTCAGCTCAAGATAATGGTCAATTCCCTAGATCATCAAAAAATGGACTCACCAGGCCACTCCGAGTTTCTAATTCTCCAAAAATGTCTTTGAAAGACCCAACTTCCCCACGGCGAAAGAATCATGATCTGGTTATGAAACCCATCCGAAGTTCAAGGGTTCCCATTGAACCAGCACCATGGAAGCAGCAAGATGGAAATCAAAGCTCCCAGAAACAGAATTTAAGGGGCGTAAAAGCTCCAACGAGAGCACCGGATTCCTTTCCTTCTGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTTAGAGCATTAAAACAGATACTTGAAGCAATGCAAGAAAAGGGACTATTAGAGAGCAGAAAAGAAGAACAAGCTCCAAATGTTGTTGGAAGTCAAAGTGACTATGAACCAAAAGCTACCAATCAAAATCAGAATACAAGGTCAGTAAGGCAACAAAACACTCAGAGAAACAATTTTCTATCTTCCACAGTCAAAGGATCTGACTCAGCAAGGGCTTTTGAATCCTCAATAGTGATAATGAAACCGGCAAAACTTGTTGAGACAACTGTGATTCCTGCTTCTTCAGTCATTCCAATTGGTGGCCTTTCTGGTTCCCAGAAACACCAGAATGGTGCTGTATATGTTGATAATAAAACCAGTACATCTACTACTCGAGTAGCAAAAGATAAGTCTCCCAGAAACATTCACCGGGATGTGTCTGCCAGTTCCATTGATAAGAAAGCAAGTAGTAGTAAGACTACAAGATTAATACAATCTCAATCTAGGTCTCAACAACTTCCAAAAGAAAATAGACAAAGTTCAGTGAAGCACTCAGGATCTGTGAGCCCAAGGTTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGGTCTCGTCCCCCTGCCCCACCATCAGATTCCAACAAACCCAGAAGGCAATCTGGTAAGAAGGCAACAGAATCGGGTTCACCAGGTGGAAGACAAAGACCCAAATCCCTCAACGTACCGCATGGTGATGAGCAATTGAGTGAGATTAGCAATGAACCAAGGAGTTTAAGTTTCCAGGGGGATGAAATTTCTCTGCAATCAAACAGTTTAACTGTCAACTCAAAGATGGATATGGAAGTCACAAGTAGTTTACAAACTGTTGAAATTGATGACAGCCAAAGCCCATCTTTGAAGGCTGTGAAGCAATTGATTTCAGAGACAGTGCAGAAAAAATCAACTCCAAGGTTGGATGAGGATGAGACAGTTGCAGAACTAGCAACAGATACCCCGGAACATCCAAGTCCTATCTCAGTTCTTGATGGCTCAGTGTACAGAGATGACATGCCATCCCCCGTAAAGCAGATATCTGAAGATTCAAAAGGTGAGGATGCTCAAGAATCCAAAGAAAATGAGATTAAAGATCAGTGGAACCCTGCAGATAGCCTTTCATTTAACTGCACTGGATCCCTAGAGATCAATCGCAAGAAATTACAGAACATAGACCACCTTGTCCAGAAGCTTCGACGACTGAACTCCAGTCACGATGAAGCTAGAATCGATTACATTGCTTCCCTATGTGAAAACACAAATCCAGACCACAGATACATTTCCGAAATATTATTAGCTTCAGGTCTCTTACTCAGAGATCTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCGTCGGGTCATCCCATTAACCCCGAGCTATTCCTTGTCTTGGAACAGACCAAAGCAAGTAGTCTACTTTCAAAAGAAGAAAGCAGCCCTGGAAAAGATGCTAACATGAAGCTAAACAAAGAGAAATTTCACAGGAAACTCATCTTTGATTCTGTGAATGAGATTCTTGGTGCAAAATTCGGCTCCTCACCCGAGCCATGTTTTCAGCCTAACAGTAACAGACTCACAAAAAAAACCTTGAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATCGAAAAAATTCAAGCCAAGAAGCCAGAATGCTGCTTAGAAGATGATCATGATGGTCTGAAAAATATGCTGTGTGAAGATGTTATGCATGGCTCAGAAAGTTGGACAGATTTTCATGGTTACTTACCTGGGGTTGTGTTGGATGTTGAGAGACTGTTATTTAAGGACTTAGTAGATGAGGTTGTGATTGGTGAATCATCAGGTTTGCGAGTCAAGCCATCGGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3318 0.4256 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHVLTARRISQKRLASGIQHSNSPFSEGSLERDSDIILHQQTATDTSLNKGVNERQRISTESSRASFSSCSSSVSSLDCKAEAEAPYDRILFPETPSRDAVMNQSTISPHFGCNSLDLRDVVKDSMYREARGLSLKTTAKEESAINATKHRDSPRPIQLSKSVDGSYRVGIDGKQSVPIDLKESIRVLAKLREAPWYYAETKELPRSSHEVKDGHWHSISKGAPWFPYEGKEISRLSFESRETIKSTPKLKELPRLSLDSKEGSLRSYSTDSKATHHSRNIYSGTSTSNDKFPTLQQPSATPSRPPSVVAKLMGLEALPDSSLAGDGQSSSTETYSAQDNGQFPRSSKNGLTRPLRVSNSPKMSLKDPTSPRRKNHDLVMKPIRSSRVPIEPAPWKQQDGNQSSQKQNLRGVKAPTRAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQAPNVVGSQSDYEPKATNQNQNTRSVRQQNTQRNNFLSSTVKGSDSARAFESSIVIMKPAKLVETTVIPASSVIPIGGLSGSQKHQNGAVYVDNKTSTSTTRVAKDKSPRNIHRDVSASSIDKKASSSKTTRLIQSQSRSQQLPKENRQSSVKHSGSVSPRLQQKKLELEKRSRPPAPPSDSNKPRRQSGKKATESGSPGGRQRPKSLNVPHGDEQLSEISNEPRSLSFQGDEISLQSNSLTVNSKMDMEVTSSLQTVEIDDSQSPSLKAVKQLISETVQKKSTPRLDEDETVAELATDTPEHPSPISVLDGSVYRDDMPSPVKQISEDSKGEDAQESKENEIKDQWNPADSLSFNCTGSLEINRKKLQNIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSPGKDANMKLNKEKFHRKLIFDSVNEILGAKFGSSPEPCFQPNSNRLTKKTLSAQKLLKELCFEIEKIQAKKPECCLEDDHDGLKNMLCEDVMHGSESWTDFHGYLPGVVLDVERLLFKDLVDEVVIGESSGLRVKPSVRRRKLFGK* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1351 1105 MobiDBLite consensus disorder prediction 781 842 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 428 443 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 399 413 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 620 661 - -
Gso4g1351 1105 Pfam DUF761-associated sequence motif 335 354 IPR032795 -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 781 796 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 713 732 - -
Gso4g1351 1105 PANTHER LONGIFOLIA PROTEIN 1 1103 IPR033334 GO:0051513
Gso4g1351 1105 MobiDBLite consensus disorder prediction 605 619 - -
Gso4g1351 1105 PANTHER LONGIFOLIA PROTEIN 1 1103 - -
Gso4g1351 1105 Pfam Domain of unknown function (DUF4378) 902 1082 IPR025486 -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 351 453 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 501 542 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 355 398 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 593 732 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 821 842 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 287 339 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 493 542 - -
Gso4g1351 1105 MobiDBLite consensus disorder prediction 294 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1351 Gso-Chr4 39251023 39257341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1351 142 1104 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.822 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1351 - - gmx:100787391 2124.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0162 5 1765900 1771742 Gso4g1351 4 39251023 39257341 PCT
Gso17g0676 17 6209733 6215775 Gso4g1351 4 39251023 39257341 PCT
Gso4g1351 4 39251023 39257341 Gso5g0162 5 1765900 1771742 PCT
Gso4g1351 4 39251023 39257341 Gso17g0676 17 6209733 6215775 PCT