Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1347 ATGGCGTTGCGCGCCGCTTCTTCAAACGCGCGTTTTCTCCTCAACACTCACTCCCAGTCCCACTACAGAAAACAAATTGCCCTCGCCACCCTCTTCCAGAAGCACGGTTTCCCCTCCTCCCTCGTCCCCTCCCTCCTCTCCCGCAACCCCTCCCTCCTCCGCACCCCCCTCCCCGACCTCCGACACTCCCTCTCCACCCTCCTCTTCTCCCTCCGCCTCCCCCAAAACGCCGTCGTCTCGCTCCTCACCTCCTCCCCTTCCCTCCTCCTCGACCCCACCTTCCTCAAAACCTTCCAATCACACTTCCCTGAAATCCAATCCCGCTTCCCCAAAATCTCCCCGTCAACCCTAGTCAACCTTCTTCTCTGCTCCCGTAAGTTCGATCTAAACCCCCTCGACCTCCCCCGCAAACTCGACCTCCTCAAAACCCGCTTCGCGTTCTCCGCCGCCACCGTGGCGAAGGTCCTGGAAGGGTTTCCCGACGTTCTTATAACAAGCGAGACTGAGATTACTAATGTAGTTGATTTTCTAGTGGAATTCGGAATCCCCGGGGATGAAATTGATCTTGTTGTTGGATTGTTTCCTAGGGTTTTGGGAATTGGAGTTGAGGACAGGCTGAGGCCGTTGGTTCGCGAAATTAAGGAGTTAGGGTTTACAAACCGCGAGCTGAGGAGAGAAATCTCGAGGGATCCGAGGATTCTGGGGATGGAAATTGGTGAATTCTCGCGGTGTCTGAGGCTGTTGGAGAGTCTAAAATGCAGGGAAGCGATCCAAGATAGGATCATGGGTTCGGGTATGGTGAGGGCGTGTTTTGAGGTGAAACTACGGGTGGATTGCTTGTGTGGTTACGGTTTGACGCGAAACGATGCTTTGAAGGTGTTATGGAAGGAGCCGAGGGTGATTTGTTATGAGGTTGGGGATATTGAGAAGAAGGTTGAGTTTTTGGTGCAGAGGATGAAGTGTGGTGTGGAGTGTGTGGTTGATGTGCCTAAGTACTTGGGTGTGAGCTTTGAGAAGCATATTGTGCCGAGGTACAGTGTGGTGGAGTGCTTGAGAGGGAAGGGTGCAATCGGGTTTGAGGTTGGGTTGAAAGATTTGGTCATGCCTTCTAGGCTTAGGTTTTATAATCTCTATGTGAAGCCATACCCGGAGTGTGAGAAGATATATGGGAGGTTGAAGGGGTGTGGTGGTGAAGGTAAGAGGAAGCATCCGGTGGGGCTGTGGAAGCTGTTTAAACCAGAGAAGTTTCCTGAGAGTGGCGAGGATGTGAAGAATATGAGGTCCTTCATGGAGTCACTGGTTTAG 1305 0.5264 MALRAASSNARFLLNTHSQSHYRKQIALATLFQKHGFPSSLVPSLLSRNPSLLRTPLPDLRHSLSTLLFSLRLPQNAVVSLLTSSPSLLLDPTFLKTFQSHFPEIQSRFPKISPSTLVNLLLCSRKFDLNPLDLPRKLDLLKTRFAFSAATVAKVLEGFPDVLITSETEITNVVDFLVEFGIPGDEIDLVVGLFPRVLGIGVEDRLRPLVREIKELGFTNRELRREISRDPRILGMEIGEFSRCLRLLESLKCREAIQDRIMGSGMVRACFEVKLRVDCLCGYGLTRNDALKVLWKEPRVICYEVGDIEKKVEFLVQRMKCGVECVVDVPKYLGVSFEKHIVPRYSVVECLRGKGAIGFEVGLKDLVMPSRLRFYNLYVKPYPECEKIYGRLKGCGGEGKRKHPVGLWKLFKPEKFPESGEDVKNMRSFMESLV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1347 434 PANTHER CGI-12 PROTEIN-RELATED 40 432 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 Pfam mTERF 68 241 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 Pfam mTERF 275 367 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 Gene3D Transcription termination factor 3, mitochondrial 167 391 IPR038538 -
Gso4g1347 434 SMART mt_12 153 183 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 SMART mt_12 323 357 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 SMART mt_12 43 74 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 SMART mt_12 224 254 IPR003690 GO:0003690|GO:0006355
Gso4g1347 434 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL 40 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1347 Gso-Chr4 39051144 39052448 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso4g1347 mTERF 3.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1347 - - gmx:100783135 817.379