Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1346 ATGTTGGGTGCCACACTAGGCCTAGTGATTCTGTTTACTTCATCTTCAGGCATGGAATTTGTTAACGGTAAACAGCAGCCAAAGAGCACATTTACATGCTTGAAGTTGGTTGCCTTAATTGCTCTATACCTCGTCTTAATTTCTCCAGCAGAATCATTTGATCCGTTGGATCCAACCGGGAACGTGACAATAAGATGGGATATAATGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACATTGTTTAACTTCCAACTATACCGCAATATTATGAATCCTGGGTGGACACTAGGGTGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAGATTGTGCAAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCTGGAGCTCCTTTTAACACGCAGTTCACAAACTGCTGCAAGGGTGGTGTGCTTACATCTTGGGGGCAGAACCCTTCAGGTGCAGTCTCAGCATTTCAGATAGGTGTTGGCCTCTCTGGCACCTCTAACAAGACAGTCAAATTGCCCAAAAACTTCAAATTGCTAGGACCAGGACCAGGATACTCATGTGGCCCAGCCAAGATTGTTCCATCCACTGCCATCCTCACAGAAGATCGTAGGCGAAAAATGCAAGCACTGATGTCCTGGAATGTGACATGCACGTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGTCAAAATAACGATACTTGTGTCACGAAAGATTCAAAGATCCTGCAACAGAATGTCACGTCACCTCACCAAAAATCAGACATCACACTCACACCAAAACCATTATTACAATGCACACACCACCTGTGTCATGTCAGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGTGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCTAATCTCAATAATGTCACCCAAGTCTACAGCTTTGAATACATGCCACTTCTTCCCTATGAATCCACAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGCTGCCAAACTCTGCCCATAAACTACCAACAACTATTACATTGATGGCAGCCTATGTGGTTTTTACATTATTCTTTCATTTGGTTGTAACACTTTTTTGA 1428 0.4398 MLGATLGLVILFTSSSGMEFVNGKQQPKSTFTCLKLVALIALYLVLISPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNTQFTNCCKGGVLTSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTAILTEDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNDTCVTKDSKILQQNVTSPHQKSDITLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESTNDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKLPTTITLMAAYVVFTLFFHLVVTLF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1346 475 Pfam COBRA-like protein 76 239 IPR006918 GO:0010215|GO:0031225
Gso4g1346 475 PANTHER COBRA-LIKE PROTEIN 18 475 - -
Gso4g1346 475 PIRSF COBRA 25 474 IPR006918 GO:0010215|GO:0031225
Gso4g1346 475 PANTHER PROTEIN COBRA 18 475 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1346 Gso-Chr4 38958285 38960687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1346 47 469 COBRA Gene Family AT3G02210 58.451 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1346 - - gmx:100780434 969.148