Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1308 ATGAGTTTACAATCACAAATCCCATCAAAGTTTAAAATAATATTCATCTCTTCCAACATGAGCAATCCTTCAGATGAGAAGGAGCAGTGTCAAAAGAAGAGGAAATCCACCATATGTGAAGCCTCCAACTTTAAGACATCAAGGAGAAGATTCTTCAGCAACAAAAATGAAGAGGATATGAACAAGGGAGTTTCAACAACACTGAAGCTTTACGATGACCCTTGGAAGATCAAGAAGACGCTAACCGATAGCGATTTGGGAATCCTAAGTAGACTCTCGCTGGCTGCAGATTTGGTGAAGAAGCAAATTTTGCCTATGTTGGGTGCAGATCATGCAAGAGCTGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAGCTCGTTCTAAAGCGATGGTCTTCATCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTCGTGAGAAGAAGAGATCTCAAGAAAGGGGATGAGATCGGATTTCATTGGGATCCGTATAATTGCGTTTTCAATTTCTGTGTCCTTAAACGAGCTATGCCAGAGAATTAA 579 0.4145 MSLQSQIPSKFKIIFISSNMSNPSDEKEQCQKKRKSTICEASNFKTSRRRFFSNKNEEDMNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLSLAADLVKKQILPMLGADHARAAETEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCVFNFCVLKRAMPEN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1308 192 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 19 187 - -
Gso4g1308 192 SUPERFAMILY DNA-binding pseudobarrel domain 73 185 IPR015300 -
Gso4g1308 192 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 19 187 - -
Gso4g1308 192 Gene3D - 74 189 IPR015300 -
Gso4g1308 192 CDD B3_DNA 75 186 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1308 Gso-Chr4 35882200 35883046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1308 41 171 B3 DNA Binding Superfamily AT1G25560 28.467 5.99e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1308 - - gmx:102667341 383.645