Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso4g1308 | ATGAGTTTACAATCACAAATCCCATCAAAGTTTAAAATAATATTCATCTCTTCCAACATGAGCAATCCTTCAGATGAGAAGGAGCAGTGTCAAAAGAAGAGGAAATCCACCATATGTGAAGCCTCCAACTTTAAGACATCAAGGAGAAGATTCTTCAGCAACAAAAATGAAGAGGATATGAACAAGGGAGTTTCAACAACACTGAAGCTTTACGATGACCCTTGGAAGATCAAGAAGACGCTAACCGATAGCGATTTGGGAATCCTAAGTAGACTCTCGCTGGCTGCAGATTTGGTGAAGAAGCAAATTTTGCCTATGTTGGGTGCAGATCATGCAAGAGCTGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAGCTCGTTCTAAAGCGATGGTCTTCATCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTCGTGAGAAGAAGAGATCTCAAGAAAGGGGATGAGATCGGATTTCATTGGGATCCGTATAATTGCGTTTTCAATTTCTGTGTCCTTAAACGAGCTATGCCAGAGAATTAA | 579 | 0.4145 | MSLQSQIPSKFKIIFISSNMSNPSDEKEQCQKKRKSTICEASNFKTSRRRFFSNKNEEDMNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLSLAADLVKKQILPMLGADHARAAETEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCVFNFCVLKRAMPEN* | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso4g1308 | 192 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 19 | 187 | - | - | |
| Gso4g1308 | 192 | SUPERFAMILY | DNA-binding pseudobarrel domain | 73 | 185 | IPR015300 | - | |
| Gso4g1308 | 192 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 19 | 187 | - | - | |
| Gso4g1308 | 192 | Gene3D | - | 74 | 189 | IPR015300 | - | |
| Gso4g1308 | 192 | CDD | B3_DNA | 75 | 186 | IPR003340 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso4g1308 | Gso-Chr4 | 35882200 | 35883046 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso4g1308 | 41 | 171 | B3 DNA Binding Superfamily | AT1G25560 | 28.467 | 5.99e-07 | 47.0 |