Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1302 ATGAGCTATCTCTATCCAGCGACAGATCGGAGCAGACCCTGTATGGAGTGGCGAATGGCGCTGTGGTCTCAAATTTTATGCATAGTCACTCTGCTGTTATGCAGCGATTGTGCAGCATCTTTTGCCAAGGAGCAGCAAAAGGACCGGGTTGGTAGGCTCCCAGGTCAAGGCTTCAACATCAGCTTCGCACACTATGCTGGGTACATCACCGTCAATGAGAAAGCTGGGAGAACACTCTTCTACTGGTTCATTGAGGCACTTGAAGATCCTCATTCTAAGCCCCTTGTTTTGTGGCTCAATGGAGGGCCTGGATGTTCGTCCATTGCTTTCGGACAGTCAGAAGAAGTTGGGCCTTTTCATATAAATTCAGATAGCAAGACCCTCCATTTCAATCCCTATTCTTGGAACCGAGTTGCCAACATTCTTTTTCTTGACACTCCTGTTGGGGTTGGATTTTCATATTCGAATAACAAATCCGACATGCTGATCAATGGCGATGAGAGGACAGCTGAGGACAATTTAGTATTTCTATTGAATTGGTTTGAGCGTTTCCCTCAATATAAAAGAAGCAACTTTTTCATCAGTGGTGAGAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATTGTAAAGTACAACTCGGTTACAAAAGAAAATGCTATAAATCTGAAAGGTTTCATGGTAGGAAATGCTCTAACAGATGATTTCCATGATCAATTGGGAATGTTTGAGTTTATGTGGTCAAGTGGTTTGATTTCGGATCAAACATACAAGCTTTTGAACCTACTATGTGATTTTCAGTCAGTTGAGCACCCGTCACATTCATGCGAAAAAATCTGGGAAATTGCTAATGAAGAACTTGGAAATATAGACCCATACAGTCTCTTTACTCCTCCGTGCCAACATGCTAATGTTAGCCAGTTAAGTCGGCTGGTGAGAAGAAAGCATAGAATTGGTAGACTCAGTGCAGAGTATGATCCATGCACTGAAAAGCACTCCATTGTATACTTCAATCGACCTGATGTCCAAACAGTTCTTCATGTTGATCCAGATCATAAGCCTGCTACATGGGAGACCTGCAGTGATGAGGTATTTACAAACTGGAAGGATTCTCCAAGAACAGTGCTCAATATTTATCATGAACTTATTCAGATGGGATTGAGGATATGGGTGTTCAGTGGTAATACAGACGTGGTAATACCCGTGACATCTACTCGCTATAGCATAAAAGCTCTCGACCTTCCTACTGTGAGTCCTTGGCGAGCATGGTATGATGATGGGGAGGTGGGAGGATGGACTCAAGAATATGCTGGCCTTACGTTTGTGGTTGTAAGGGGTGCGGGGCACGAAGTTCCTTTGCATTCACCAAAACTTGCTTTGACACTGTTCAAAGCCTTCCTAGCAGGAACATCAATGCCCAATCTTGAGCTAGTCGGTGCCTCCTGA 1452 0.438 MSYLYPATDRSRPCMEWRMALWSQILCIVTLLLCSDCAASFAKEQQKDRVGRLPGQGFNISFAHYAGYITVNEKAGRTLFYWFIEALEDPHSKPLVLWLNGGPGCSSIAFGQSEEVGPFHINSDSKTLHFNPYSWNRVANILFLDTPVGVGFSYSNNKSDMLINGDERTAEDNLVFLLNWFERFPQYKRSNFFISGESYAGHYVPQLSQVIVKYNSVTKENAINLKGFMVGNALTDDFHDQLGMFEFMWSSGLISDQTYKLLNLLCDFQSVEHPSHSCEKIWEIANEELGNIDPYSLFTPPCQHANVSQLSRLVRRKHRIGRLSAEYDPCTEKHSIVYFNRPDVQTVLHVDPDHKPATWETCSDEVFTNWKDSPRTVLNIYHELIQMGLRIWVFSGNTDVVIPVTSTRYSIKALDLPTVSPWRAWYDDGEVGGWTQEYAGLTFVVVRGAGHEVPLHSPKLALTLFKAFLAGTSMPNLELVGAS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1302 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 477 IPR001563 GO:0004185|GO:0006508
Gso4g1302 483 Pfam Serine carboxypeptidase 54 470 IPR001563 GO:0004185|GO:0006508
Gso4g1302 483 Gene3D - 330 368 - -
Gso4g1302 483 ProSitePatterns Serine carboxypeptidases, histidine active site. 441 458 IPR033124 GO:0004185
Gso4g1302 483 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Gso4g1302 483 Gene3D alpha/beta hydrolase 44 304 IPR029058 -
Gso4g1302 483 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 24 477 - -
Gso4g1302 483 Gene3D - 377 471 - -
Gso4g1302 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 143 IPR001563 GO:0004185|GO:0006508
Gso4g1302 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 154 IPR001563 GO:0004185|GO:0006508
Gso4g1302 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Gso4g1302 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Gso4g1302 483 SUPERFAMILY alpha/beta-Hydrolases 50 474 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1302 Gso-Chr4 35586476 35591868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1302 388 474 Calmodulin-binding Proteins AT2G22960 27.273 5.03e-10 57.0