Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1286 ATGTTTAAGAAGCTTTTTTTATGGGATACACATTCCTCGCAAGAGAAGGAGAAAAGAAGGGCTTGGATATTTGGGAGAGTTAAGACCAAGAGATTGCCTTCAATTACAGCTCCACCACCACCTTCAAAAGAAACAAGACTAAGTGAAGTTGAGGAAGAACACAGCAAGCATGCTTTAACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCTATTACTGCTGCTCAAGTTGCTGTTGAGGTTGTTAAGCTCCAATCTGCTGCTCATCAACAACTTAAAGAAAAACAAGAACAACTTCAACCTGTTAAAACTAGCCATGATGTTCCTCATTCCACACACCAATGCCAGAGGAAGATTCAAGAATCTTCAGCCATCAAAATTCAAATAGCATTTAGAGGTTACCTAGCAAGGAAAGCTTCGAGAGCATTGAAGGGAATAGTTAAGCTTCAAGCTATCATTCGCGGAAGAGCTGTGAGACGCCAAGCTTTGAATACTCTAAAGTGCTTGGAGTCAATAGTAAGTATCCAGTCACAGGTCTTTGCAAGGAAACTCCAAATGGTTGAAGGAAGATGGGATTGTGGTGAACATGAAGAGATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGCATTTTGTTGAAGGAAGAGGTAAAAGCCTCTTGCATAAGCAAGAAAGAAGCAGTTCTTAAGAGAGAGAAAGTAAAAGAATACTCATTTAACCACAGAAGGTCAGCTGAATCAGAAAGAAATAAAATAAATGGAAGATGGAGATACTGGATGGAGCAGTGGGTAGACACACAACTTTCTAAGGGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATTATTCTAGACCAGGGGAGGAATGTGAAAGGAGTCAACTAAAGCTTAGAAATGTTCATAGACAAAATCAGGTTGAAGCATTCGATTCTCCACCACTTGCTTCAAGGAACTCTTTTCCCCACAGGAGCCAAACTTCAGAGGCAGAAGATCACTCAGTTCCAAGCTCTCCTGCAATTCCTACATACATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGGATAGGAGGGAGTTTTGACATCAACTCTGATAGCTATTCACTATGCAAGAAAAAGTTGCCTATTGTGACTTCTATTAATGGTGAAGTGTTTAGTAATGGTAGGATGGGCAAACTCAGTAGTAATCAGCAAAGATCTCCTAGCTTAAAGGGCCTTCCAAGTCCTGTAAAATTGAGTCAGACATTGAGGGATCTCAGCATTAATTCAGATTGCTCAGTGCCAATTTGA 1353 0.4102 MFKKLFLWDTHSSQEKEKRRAWIFGRVKTKRLPSITAPPPPSKETRLSEVEEEHSKHALTVAIASAAAAEAAITAAQVAVEVVKLQSAAHQQLKEKQEQLQPVKTSHDVPHSTHQCQRKIQESSAIKIQIAFRGYLARKASRALKGIVKLQAIIRGRAVRRQALNTLKCLESIVSIQSQVFARKLQMVEGRWDCGEHEEMQGSRDKIIRMDSNSERRWDDSILLKEEVKASCISKKEAVLKREKVKEYSFNHRRSAESERNKINGRWRYWMEQWVDTQLSKGKELEDLDSVFSSHYSRPGEECERSQLKLRNVHRQNQVEAFDSPPLASRNSFPHRSQTSEAEDHSVPSSPAIPTYMAATKSTQAKARSTSSPRARIGGSFDINSDSYSLCKKKLPIVTSINGEVFSNGRMGKLSSNQQRSPSLKGLPSPVKLSQTLRDLSINSDCSVPI* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1286 450 Gene3D - 121 171 - -
Gso4g1286 450 PANTHER IQ-DOMAIN 5-RELATED 3 444 - -
Gso4g1286 450 PANTHER IQ-DOMAIN 11 3 444 - -
Gso4g1286 450 Pfam Protein of unknown function (DUF4005) 339 424 IPR025064 -
Gso4g1286 450 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Gso4g1286 450 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Gso4g1286 450 MobiDBLite consensus disorder prediction 320 353 - -
Gso4g1286 450 MobiDBLite consensus disorder prediction 409 430 - -
Gso4g1286 450 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Gso4g1286 450 MobiDBLite consensus disorder prediction 320 336 - -
Gso4g1286 450 MobiDBLite consensus disorder prediction 32 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1286 Gso-Chr4 34663826 34667060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1286 1 449 IQD Protein Family AT5G13460 42.644 2.01e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1286 - - gmx:100794802 849.736