Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1284 ATGCAGCAAGGTGATCCAACGGTCCTAAGCTTGAGGCCTGGTGGTGGTCGTGGCGGCGGAAGCAGGCTTTTCGGTCACTCCTCCTCCTCTCTCTCCGCCGATCTCCCTCTCTGCCGCCCTCATGCCTATTTCTCTCTCAAGACCAGAGATTCACGGTTTGAGGGTCATGAGCGTGTGCGATATAGCAGAGATCAGCTTTTACAGCTTCAAGAGGCTGTTGAGGTCCCTGATGATATACTAAAGATTAAACAAGATATAGAAGCTGAAATTTTTGGTGAAAATCCAAGTTGGGGCCGTGCTGAAAGCAATCTTCCTCATCAATTACAAAATCGGTATTCTGAGCCAGATAACCGTGATTGGCGTGGTCATTCTGGACAACTTCCTGCTAATTCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAGGGAGTTTGGTAATAGACAGCAGGATGCTAGTCAGGTTAATCGTCATGACCAACTTAATTCCCAGTTTGCTAGAACACAAATCTCTTCTATGCAAGGGGGAGGACCTACTCCTACGCTGGTCAAGGCCGAGGTTCCGTGGTCTGCTAGAAGGGGAAGTCTATCTGAAAAGGATCGCGTCATAAAAACTGTGAAAGGAATACTGAATAAGTTGACTCCTGAAAAATTTGATATCCTGAAGGGTCAGTTAATCGATTCTGGCATTACATCAGCTGACATCTTAAAGGATGTCATTTCACTTATTTTTGATAAGGCTGTTCTAGAACCAACATTTTGCCCCATGTATGCTCAGCTCTGTTCTGATCTAAATGAAAAGTTGCCTCCATTCCCATCTGAAGACCCTGGTGGGAAAGAAATCACCTTTAAGAGAGTGCTCTTGAATAATTGCCAGGAGGCATTTGAAGGTGCTGAAAATCTGAGGGAGGAACTAAAAAGGATGACTGCCCCTGAGCAGGAGATGGAGCGTATGGACAAGGAAAGGCTGCTCAAGCTTCGTACCCTTGGAAATATCCGTTTAATTGGTGAGCTATTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGATCCCCAGACAGCATGTTTTGTCCAGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCTTAAATCGCGGCGTATAAATGACGTTTACTTTAGCCGATTGAAAGAATTAAGCTCAAACCTACAACTTGTACCCCGACTTAGGTTCATGATTCGGGATGTTATAGAGTTGCGTGCTAGTAACTGGGTTCCTAGACGCGAAGAGGTCAAAGCCAAAACCATTACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGGCCAGGTGCAACTGCAAGTATGAGAAATCCCCGTGGTGGTGTTCAAGGAAATGCCAGCTCTGGGGGTTTTCCTATTGCCCGACCTGGTGCAGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGATTTGATAATGGCAACTGGGAGATGCCTAAGACTAGATCTATGCCAAGAGGAGATTTGCCAGGTGTTCAAGCTGCTGGACAGAGCAACTCTGCTTTACTTTCCAAGTCCACGACCCTCAATTCAAAACTGCTACCTCAAGGTAGTGGTGGTATTATAAGTGGAAGAAATAGTGCCCTAGTACATGGAGGTGGTACAAACTTTGGTTTAGGACCTGAGGCAGCACCTCAACTCTCTTCACCTGCTAAAACAGCCACTCCTGTTCCTGTATCCTCTGAGAAGCCACAACATCCAGCTGCAAGATTGAATACTGATAATCTTCGCTGCAGAACTGTCTCTCTTCTAGAAGAATATTTCAGTGTTCAGCTTTTGGAAGAGGCATTACAGTGTGTGGAGGAATTAAAATCTCCTTCTTACCACCCTGAGGTTGTTAAGGAAGCCATTTCCCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCTGTTGCCAATCTCATTGAGTATCTGTATATTAAGAAGATTCTTACCCCTATAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTCTACTGGATGATATTGGTATAGATTTACCTAAAGCACCAAGTAATTTTGGTGAGATAATTGGAAAACTAATTTTGGCTGGGGGATTGGATTGTAAGCTGGTGAGAGAGATTCTCAAGAAGGTGGATGATGGCATGTTCCAGAGAGCAATATTTGACAGTGTGGTGGGGGCCATTAGATCTGCATCTGGGCAAGCCGTGTTGGATGCTCAAACATCTGATATTGAGGCCTGCCAGAGTATGCTCAAGTGA 2325 0.4486 MQQGDPTVLSLRPGGGRGGGSRLFGHSSSSLSADLPLCRPHAYFSLKTRDSRFEGHERVRYSRDQLLQLQEAVEVPDDILKIKQDIEAEIFGENPSWGRAESNLPHQLQNRYSEPDNRDWRGHSGQLPANSDERSWENLRDNREFGNRQQDASQVNRHDQLNSQFARTQISSMQGGGPTPTLVKAEVPWSARRGSLSEKDRVIKTVKGILNKLTPEKFDILKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEDPGGKEITFKRVLLNNCQEAFEGAENLREELKRMTAPEQEMERMDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSPDSMFCPVEENVEAICQFFNTIGKQLDESLKSRRINDVYFSRLKELSSNLQLVPRLRFMIRDVIELRASNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNPRGGVQGNASSGGFPIARPGAGGLMPGMPGTRKMPGMPGFDNGNWEMPKTRSMPRGDLPGVQAAGQSNSALLSKSTTLNSKLLPQGSGGIISGRNSALVHGGGTNFGLGPEAAPQLSSPAKTATPVPVSSEKPQHPAARLNTDNLRCRTVSLLEEYFSVQLLEEALQCVEELKSPSYHPEVVKEAISLALDKSPPCVEPVANLIEYLYIKKILTPIDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDCKLVREILKKVDDGMFQRAIFDSVVGAIRSASGQAVLDAQTSDIEACQSMLK* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1284 774 ProSiteProfiles MI domain profile. 609 731 IPR003891 -
Gso4g1284 774 MobiDBLite consensus disorder prediction 1 25 - -
Gso4g1284 774 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 773 - -
Gso4g1284 774 SMART ma3_7 610 722 IPR003891 -
Gso4g1284 774 Gene3D - 194 430 - -
Gso4g1284 774 Pfam MA3 domain 614 722 IPR003891 -
Gso4g1284 774 SUPERFAMILY ARM repeat 197 432 IPR016024 -
Gso4g1284 774 SMART if4_15 203 429 IPR003890 GO:0003723|GO:0005515
Gso4g1284 774 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 773 IPR045208 GO:0003743
Gso4g1284 774 MobiDBLite consensus disorder prediction 109 134 - -
Gso4g1284 774 MobiDBLite consensus disorder prediction 578 602 - -
Gso4g1284 774 SUPERFAMILY ARM repeat 605 747 IPR016024 -
Gso4g1284 774 Pfam MIF4G domain 204 429 IPR003890 GO:0003723|GO:0005515
Gso4g1284 774 Gene3D - 603 770 - -
Gso4g1284 774 Coils Coil 288 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1284 Gso-Chr4 34284237 34291587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1284 1 772 Eukaryotic Initiation Factors Gene Family AT5G57870 62.673 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1284 K03260 - gmx:100800438 1475.3