Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1271 ATGTGGTTTGCTGATGAGTTCATGTTCATGTTGAGTGATGGACTACTTGAGACTGTGGGGATCTTGTTCATGACTACCAAAACTATTGAGCGATACTATCGTAGCTCTTTTACTCCTCAAGACGAACACGTTGAATGTGAAACTCAGAGCTGGTACCAAGAGGTGTCAAAGCTAAAGGCAAAGTATGATTCTCTTCAAAGGACCCAGAGGCATTTTCTTGGGGAAGATCTTGGACCATTGAACACAAAGGAGCTGCAGAATCTTGAGAAACAACTTGAAGGGTCTTTAGCACAACCAAGGCAAAGGAAGTCCTTTGTTCTTTTGGAAAAGGGA 333 0.4264 MWFADEFMFMLSDGLLETVGILFMTTKTIERYYRSSFTPQDEHVECETQSWYQEVSKLKAKYDSLQRTQRHFLGEDLGPLNTKELQNLEKQLEGSLAQPRQRKSFVLLEKG 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1271 111 ProSiteProfiles K-box domain profile. 48 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso4g1271 111 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1 26 108 - -
Gso4g1271 111 Pfam K-box region 47 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso4g1271 111 PANTHER SERUM RESPONSE FACTOR HOMOLOG 26 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1271 Gso-Chr4 32854312 32857008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1271 18 109 MADS-box Gene Family AT2G45650 52.688 2.06e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1271 K09264 - gmx:121174729 227.639