Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1265 ATGGCATTCCATTTCCACATTATGTTTATGATCTTGATCTTCGTAGCTCTTGTGCAGCCGAGTGAGCGAGTCAACGCGGAGCCGACTCAGGACAAACAAGCCCTCCTCGCATTCCTCTCCCAGACCCCGCACGCGAACCGGGTCCAATGGAACACCTCCGGTTCGGCCTGCACCTGGTTCGGAGTCCAGTGCGACTCGAACCGCTCCTTCGTTACTTCCCTCCACCTCCCCGGCGCTGGCCTTGTGGGCCCCATCCCCCCCAACACAATCTCCCGCCTCACGCGCCTCCGTGTCCTCAGCCTCCGCTCCAACGCCCTCGTGGGCCCCATCCCCGCCGACTTCGCCAACCTCACCTCCCTCCGCAACCTCTACCTCCAGAACAACCACCTCTCCGGCGAGTTCCCCGCAACCCTAACTCGCCTAACTCGCTTGACTCGCCTCGAACTCTCCTCCAACAACTTCTCCGGCGCAATCCCATTCTCTCTCAACAACCTCACTCGTCTAACAGGCCTCTTCCTAGAAAACAATTCCTTCTCCGGCAACCTCCCCAGCATTACATTAAAGTTAGTTAACTTTACTGTCTCCAATAATCGCCTCAACGGCTCCATCCCTAACAGCTTATCGCGTTTTCCGGGAGAGTCGTTCTCCGGAAACAACGACCTCTGCGGGAAACCGTTACAACCATGCACACCCTTCTTTCCTGCTCCCGCCCCTTCGCCTTCTATTGCTGTTCCACCGGTGGAACAACAACAGCAGAAGGCGAAGGGGCTTTCTATCTCTGCCATCGTGGGAATTGTGGTCGGGTCTGCTTTGTTTATATTGCTATTACTTTTACTTCTGTTTCTATGCTGCCGGCGGAGGCGAAGACCCGCGAAGCCGCCGCCACAGGCTGTGGCGGCGGCAGCGGCAGCGCGTGGAGGGGCCGCGGAGGGCGGAACGTCGTCGTCGAAGGACGAAGACATCACGGGGTCAGTGGAGGCTGCCGAGAGGAATAAACTAGTGTTTTTGGAGGGTGGAGTGTATGGGTTTGCATTGGAGGATTTGCTGAAGGCTTCTGCGGAGGTTTTGGGAAAGGGGAGCATGGGGACTTCTTATAAGGCCATTCTGGAGGACGGGACCACGGTCGTGGTGAAGAGGTTGAAGGACGTGGCGGTTGCCAAGAGAGAGTTCGAGGCGCAAATGGAGGTTGTTGGGAACGTTAAGCACGAGAATGTGGTTCCTCTTAGAGCGTTTTACTACTCCAAGGATGAGAAGTTGCTCGTCTACGATTACATGGCCGCCGGCAGCTTGTCTGCACTTCTTCACGGGAGCAGAGGGTCAGGGCGAACGCCGTTGGATTGGGACACCCGAATGAAAATAGCACTGGGAGCTGCAAGAGGCCTCGCGTGCCTCCACGTGTCATGCAAACTGGTCCACGGTAACATCAAATCCTCCAACATCCTCTTCCACCCGACCCACGAAGCCTGTGTTTCAGACTTCGGGCTCAACCCGATATTCGCAAACCCGGTCCCCTTGAACCGAGTCGCGGGTTATCGGGCACCAGAGGTTCAGGAAACCAGAAAGGTCACCTTCAAATCGGATGTGTACAGTTTCGGCGTGCTGATGCTGGAACTTCTAACAGGTAAGGCACCAAACCAAGCCTCGCTGAGCGAGGAAGGGATCGACCTTCCGCGATGGGTGCAGTCTGTGGTTCGTGAAGAGTGGACCGCTGAAGTGTTCGACGCGGAACTCATGAGGTACCATAACATTGAAGAGGAGATGGTTCGGTTGTTGCAGATTGCGATGACGTGCGTTTCGCTCGTGCCAGATCAGAGGCCCAACATGGATGAGGTGGTGCGCATGATCGAAGATATTAGCCGCAGCGAGACCACCGATGATGGGTTACGCCAGTCGTCTGATGATCCTTCGAAAGGATCGGACGGTCACACGCCCCCGCAGGACGCTAGGACTACCCCTAGGTCGGACACGTCGTAG 1974 0.5648 MAFHFHIMFMILIFVALVQPSERVNAEPTQDKQALLAFLSQTPHANRVQWNTSGSACTWFGVQCDSNRSFVTSLHLPGAGLVGPIPPNTISRLTRLRVLSLRSNALVGPIPADFANLTSLRNLYLQNNHLSGEFPATLTRLTRLTRLELSSNNFSGAIPFSLNNLTRLTGLFLENNSFSGNLPSITLKLVNFTVSNNRLNGSIPNSLSRFPGESFSGNNDLCGKPLQPCTPFFPAPAPSPSIAVPPVEQQQQKAKGLSISAIVGIVVGSALFILLLLLLLFLCCRRRRRPAKPPPQAVAAAAAARGGAAEGGTSSSKDEDITGSVEAAERNKLVFLEGGVYGFALEDLLKASAEVLGKGSMGTSYKAILEDGTTVVVKRLKDVAVAKREFEAQMEVVGNVKHENVVPLRAFYYSKDEKLLVYDYMAAGSLSALLHGSRGSGRTPLDWDTRMKIALGAARGLACLHVSCKLVHGNIKSSNILFHPTHEACVSDFGLNPIFANPVPLNRVAGYRAPEVQETRKVTFKSDVYSFGVLMLELLTGKAPNQASLSEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVRLLQIAMTCVSLVPDQRPNMDEVVRMIEDISRSETTDDGLRQSSDDPSKGSDGHTPPQDARTTPRSDTS* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1265 657 Pfam Leucine rich repeat 83 130 IPR001611 GO:0005515
Gso4g1265 657 MobiDBLite consensus disorder prediction 617 636 - -
Gso4g1265 657 Gene3D Transferase(Phosphotransferase) domain 1 425 637 - -
Gso4g1265 657 ProSiteProfiles Protein kinase domain profile. 350 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1265 657 SUPERFAMILY L domain-like 29 227 - -
Gso4g1265 657 Gene3D Phosphorylase Kinase; domain 1 317 424 - -
Gso4g1265 657 PANTHER OS05G0480400 PROTEIN 12 637 - -
Gso4g1265 657 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Gso4g1265 657 SUPERFAMILY Protein kinase-like (PK-like) 354 615 IPR011009 -
Gso4g1265 657 MobiDBLite consensus disorder prediction 637 657 - -
Gso4g1265 657 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Gso4g1265 657 Pfam Protein kinase domain 354 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1265 657 MobiDBLite consensus disorder prediction 617 657 - -
Gso4g1265 657 Gene3D Ribonuclease Inhibitor 189 229 IPR032675 -
Gso4g1265 657 PANTHER OS05G0588300 PROTEIN 12 637 - -
Gso4g1265 657 CDD STKc_IRAK 356 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1265 Gso-Chr4 32558245 32562460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1265 26 642 Receptor kinase-like Gene Family AT5G58300 53.748 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso4g1265 Pkinase 8.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1265 - - gsj:114409597 1172.53