Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1252 ATGACGGTCATACGACCGAACTACAGGACAGATGATTGGCACAAGATATGTGGCACATGGGTCTTTATTACTTCCACTCACCAACCACTGTTGCCTGTACCTCCATTTGATCTGAGAATTATACATAGAAAGAATAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGCATTATGTAACAGAATATCTTTGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATCATTAAAAATGACAAATACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTAAAACTTGTCAATAAGCATGACCCACCAGATCTACACCACTTTTTGCGCCTTTATGATTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCAAGCAAACTTGTACGAATTTCAGAAGTTCAAGCAAGAATCTGGAGGGGAAGAATATTTTACGTTGAACAAATTGCAGCTCATTACTCGCCAATGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAGAACATTCTAATCAAAAGTTACAGAAGATGTCAGATAAAGGTTATTGATCTAGCAGGAAGCAGTTGCTTCCAAACAGACAATTTGTGTCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTCGGCTGTATCTTGGCAGAGTTATGCTCTGGTGAAGTACTATTTCCAAATGATGCAGTTGTGATGATTCTAGCACGCATGATTGGAATGTTGGTTCTATTGATATGGAGATCTGTAAGAGAATACACATTACGGATAGCTGAATTGTCACTTGAACTTGAAGTTGGAGAGGCAAAGATCATTCCAGCTCAGAAAGCTCAAGAGGCATCTTGTATTCTTGCTAAATTTGAAGAAGCACAAGATACAATGAGAGAAGCAGATATTATGATCAACGAATTTGTGATAGCTAATGAGTAA 1068 0.3848 MTVIRPNYRTDDWHKICGTWVFITSTHQPLLPVPPFDLRIIHRKNRTGFEENKELPIVLNTVLAGRHYVTEYLCSAAFSRVVQAHDLQTGIDVCLKIIKNDKYFFDQSLDEIKLLKLVNKHDPPDLHHFLRLYDYFYHQEHLFIVTELLQANLYEFQKFKQESGGEEYFTLNKLQLITRQCLEALQYLHSLGIVHCDLKPENILIKSYRRCQIKVIDLAGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLVLLIWRSVREYTLRIAELSLELEVGEAKIIPAQKAQEASCILAKFEEAQDTMREADIMINEFVIANE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1252 355 Gene3D Transferase(Phosphotransferase) domain 1 121 288 - -
Gso4g1252 355 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 37 289 - -
Gso4g1252 355 PANTHER DUAL SPECIFICITY PROTEIN KINASE 37 289 - -
Gso4g1252 355 ProSiteProfiles Protein kinase domain profile. 67 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1252 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gso4g1252 355 SMART serkin_6 68 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1252 355 CDD PKc_DYRK_like 69 288 - -
Gso4g1252 355 Gene3D Phosphorylase Kinase; domain 1 62 148 - -
Gso4g1252 355 SUPERFAMILY Protein kinase-like (PK-like) 57 284 IPR011009 -
Gso4g1252 355 Pfam Protein kinase domain 77 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1252 Gso-Chr4 31714777 31797715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1252 64 288 MAP Kinase Gene Family AT5G19010 33.750 1.67e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gso4g1252 Pkinase 7.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1252 - - gsj:114410732 720.694