Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1249 ATGGGAACCTCCGCGAACGCTGTCGCAGGTGGTCGTGGCGGCGCCCCTGTCCCCAAAGACGTCGACTACGCCAATTACTTCTGCACCTACGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGACCGCGTTCGCATGGACGCTTATTTCAACGCCATTTTTGAAAACAAACGCCACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCGGCACAGGCAGGTGCGAGGAAGGTGTATGCAGTGGAAGCTACCAAGATGTCGGAACACGCACGTGCACTCATCAAAGCGAATAATCTCCAGGACGTAGTTGAGGTCATCGAGGGATCGATGGAGGAAGTTACCTTGCCAGAGAGAGTTGATGTGATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATACATGCTCGTGATTGCTGGCTCAAACCGACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCCGGACTGGGATAGTAGATCACAAATTGGGTGATTATGAGTCGACTATGGATGATTGGCACAACTTTGTTGATGAAACAAAAACCTACTATGGTGTTGATATGGGCACTTTAACGAAACCTTTTTCAGAGGAGCAGAGGAAATATTATCTACAGACATCATTGTGGAACAGCCTTCATCCCCATCAAGTCATAGGAACTGCTGGTATAATAAAGGAAATTGATTGTTTAACTGCCACTGTGGCTGACATAGAGAAAGTTAGATCAAATTTTTCTATGTCAATAACCGTGGAAAACACAAAGTTATGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTGAACACGAGATTGAGTTAACTACAGCTCCCAGTGTAGATTATGGTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCCATGCGTCTGAATGAAGGTGATGATTTAAGGGTTTCTTTTCTAATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCATTCTGGCAAGATACTTGCACCTTTCAAAAATAAGTACTACATTGAGTAG 1125 0.4551 MGTSANAVAGGRGGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKRHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALIKANNLQDVVEVIEGSMEEVTLPERVDVIISEWMGYFLLRESMFDSVIHARDCWLKPTGVMYPSHARMWMAPIRTGIVDHKLGDYESTMDDWHNFVDETKTYYGVDMGTLTKPFSEEQRKYYLQTSLWNSLHPHQVIGTAGIIKEIDCLTATVADIEKVRSNFSMSITVENTKLCGFGGWFDVHFRGRSEDPAEHEIELTTAPSVDYGTHWGQQVFLLHPPMRLNEGDDLRVSFLMSRSKENHRLMEVELGCEIHQHSGKILAPFKNKYYIE* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1249 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 10 362 - -
Gso4g1249 374 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 133 - -
Gso4g1249 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 359 IPR029063 -
Gso4g1249 374 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 351 IPR025799 GO:0016274|GO:0018216
Gso4g1249 374 CDD AdoMet_MTases 64 164 - -
Gso4g1249 374 Gene3D - 167 374 - -
Gso4g1249 374 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 10 362 IPR025799 GO:0016274|GO:0018216
Gso4g1249 374 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1249 Gso-Chr4 31155661 31168898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1249 25 326 C2H2 Transcription Factor Family AT3G12270 31.579 4.62e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1249 K11434 - gmx:100795134 768.844