LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso4g1232	ATGGATGGGAACAAGGACGACGCGTTGAAATGTTTGAGTATCGGCAAAGAGGCGTTGGAAAGCGGCGATCGGTCACGTGCGTTGAAGTTCGTAACGAAGGCACGTCGCCTCGACCCCACCCTCCCCGTCGACGATCTATTGTCCACGATAGACGCGGATGCAGGGGATCAGCCTGCCGCCGCGGAGGCGGCGGAGTCCACAAAGTCTCCCGATCATCCTTCTATCCGCCGGAGGGCTGCTGGGGCGGCCGCTGCCGCTCCAAAGGGGCCCTCGTCGGCCTCGTCCTCTTCGGCCTCATACACAGAAGAGCAAGTCTCAATTATCAGAGAGATAAAGAGAAAGAAGAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTATTGAGGACGTGAGGAAGTCGTACAGGAAACTGTCTCTTAAGGTTCATCCCGATAAGAACAAAGCCCATGGGGCCGAGGAAGCGTTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGTAAGAGGAAGTATGATGTTTCGGGAGAGGATGAAGCGATCTACGAGCAGCGCACTGCAAGGCCGGCAGCCAGGGGTTATAATGGTTACTATGAAGCTGATATTGATGCTGAGGAGATATTCAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGGTTCAATGGGTTCAATGGTCATAGGCATGCTGCTGAACATGGTTCTGGTGGTTTTAATGTTCGCACATTAATTCAGTTACTGCCAGTGCTGCTGATTCTACTATTGAACTTTTTGCCTTCTTCGGAGCCCTTGTACTCGCTATCGAAGAGTTATCCTTATGAACATCGGTTTACCACACCCAAGGGTGTCAACTATTATGTCAAATCTACAAACTTTGTTCAGGAGTATCCCTTGGGGAGCGAGGAACGATCAAAAATTGAAGAAAGGGTAGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCATTTTGAGTTGCAGCGTCGCCAATGGGGTTATATCCGGGAAACACCCCACTGCGATATGTTGCGGAAGTTTGAGGTGGTGAATTAA	1098	0.4991	MDGNKDDALKCLSIGKEALESGDRSRALKFVTKARRLDPTLPVDDLLSTIDADAGDQPAAAEAAESTKSPDHPSIRRRAAGAAAAAPKGPSSASSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTIEDVRKSYRKLSLKVHPDKNKAHGAEEAFKAVSKAFQCLSNEESKRKYDVSGEDEAIYEQRTARPAARGYNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGPAGFNGFNGHRHAAEHGSGGFNVRTLIQLLPVLLILLLNFLPSSEPLYSLSKSYPYEHRFTTPKGVNYYVKSTNFVQEYPLGSEERSKIEERVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN*	366

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso4g1232	365	ProSiteProfiles	dnaJ domain profile.	116	180	IPR001623	-
	Gso4g1232	365	ProSitePatterns	Nt-dnaJ domain signature.	157	176	IPR018253	-
	Gso4g1232	365	Gene3D	DnaJ domain	112	226	IPR036869	-
	Gso4g1232	365	CDD	DnaJ	116	169	IPR001623	-
	Gso4g1232	365	Pfam	DnaJ domain	116	177	IPR001623	-
	Gso4g1232	365	PRINTS	DnaJ domain signature	118	136	IPR001623	-
	Gso4g1232	365	PRINTS	DnaJ domain signature	136	151	IPR001623	-
	Gso4g1232	365	PRINTS	DnaJ domain signature	152	172	IPR001623	-
	Gso4g1232	365	SUPERFAMILY	Chaperone J-domain	112	231	IPR036869	-
	Gso4g1232	365	PANTHER	AT29763P-RELATED	1	363	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso4g1232	Gso-Chr4	29165456	29167161	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso4g1232	111	177	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	39.437	1.53e-08	53.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso4g1232	K09518		-	gmx:100788812	655.21

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