Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1225 ATGGTATGTATGGATAATTTGCTATGTGATGAGGTGTGGCTTTCAAAGTCTGCAAATACTTTTGAAGAAGTTATTAGTGACCCTGTTGCACTAAAGAGTTATGAAAATGAAGAGTTTGAAGAGGTTTTTGCAGTGTGTCTAGAGAAGGAGGTCTTGTGCTTGCCCGAACCTGACTATACAAAGTACTTACACTACAACAATTTCATTTTTCCTAGCTGTAGAGTTATTCAATGGTTTATCAAGTGTAGAAGCCACTTTAATCTTTCTTTTGGGACAGTTTTCTTGTCTCTTAATTATCTTCATCGCTTTGTATCCATTTGTCAATGCAATGATTGGGAATACTGGATGCTTGAATTGCTTTCTATTGCATGCTTATCAATTGCCATAAAGTTGAATGAGATATCAGGACTTTCGTTGCATGAAATTCAGGTGACTAATTGTCATTACATCCATCATTCCTTGTTCATATGA 471 0.3567 MVCMDNLLCDEVWLSKSANTFEEVISDPVALKSYENEEFEEVFAVCLEKEVLCLPEPDYTKYLHYNNFIFPSCRVIQWFIKCRSHFNLSFGTVFLSLNYLHRFVSICQCNDWEYWMLELLSIACLSIAIKLNEISGLSLHEIQVTNCHYIHHSLFI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1225 156 CDD CYCLIN 76 135 IPR013763 -
Gso4g1225 156 SUPERFAMILY Cyclin-like 37 148 IPR036915 -
Gso4g1225 156 PANTHER CYCLINS 30 147 IPR039361 -
Gso4g1225 156 Pfam Cyclin, N-terminal domain 42 146 IPR006671 -
Gso4g1225 156 Gene3D - 62 155 - -
Gso4g1225 156 PANTHER CYCLIN-D7-1-RELATED 30 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1225 Gso-Chr4 28652865 28654431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1225 6 150 Core Cell Cycle Gene Families AT5G65420 30.464 4.74e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1225 K18813 - gsj:114409573 333.183