Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1182 ATGAGTTTACAATCACAAATCCCATCAAAGTTTAAAATAATATTCATCTCTTCCAACATGAGCAATCATTCAGATGAGAAGGAGCAGTGTCAAAAGAAGAGGAAATCCACCATATGTGAAGCCTCCAACTTTAGGACATCAAGGAGAAGATTCTGCAGCAACAAAAATGAAGAGGAGATGAACAAGGGAGTTTCAACAACACTGAAGCTTTATGATGACCCTTGGAAGATCAAGAAGACGCTAACCGATAGCGATTTGGGAATCCTAAGTAGACTCTCGCTGGCTACAGATTTGGTGAAGAAGCAAATTTTGCCTATGTTGGGTGCAGATCATGCAAGAGCTGCAGAAACTGAAGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAGCTCGTTCTAAAGCGATGGTCTTCTTCCAAGAGCTATGTTCTTATTGCAAAGTGGAACCAAGATTTCGTGAGAAGAAGAGACCTCAAGAAAGGGGATGAGATCGGATTTCATTGGGATCCATATAATTGCGTTTTCAATTTCTGTGTCCTTAAACGAGCTATGCCAGAGAATTAA 579 0.4145 MSLQSQIPSKFKIIFISSNMSNHSDEKEQCQKKRKSTICEASNFRTSRRRFCSNKNEEEMNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLSLATDLVKKQILPMLGADHARAAETEEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIAKWNQDFVRRRDLKKGDEIGFHWDPYNCVFNFCVLKRAMPEN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1182 192 SUPERFAMILY DNA-binding pseudobarrel domain 73 185 IPR015300 -
Gso4g1182 192 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 18 187 - -
Gso4g1182 192 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 18 187 - -
Gso4g1182 192 CDD B3_DNA 75 186 IPR003340 GO:0003677
Gso4g1182 192 Gene3D - 74 189 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1182 Gso-Chr4 25160600 25161400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1182 77 172 RAV Transcription Factor Family AT1G50680 33.010 4.85e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1182 - - gmx:102670334 384.415