Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1170 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCGTGCAACCTGTTCTGCCTCCCTGAGAACTACCAGATGAAGTACTACCTCTATCACATCCTCTCCTGGCCCCAGCTCCTCTACGTCGCCGAAGACTACAACGGCCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAAGAGACCACTGACTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAGCTAGGCCTCGCCACTAAGCTCATGACCGCCGCCCAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTACGTGTCCCTGCACGTGCGCAAGAGCAACCGCGCGGCCTTCAATTTGTACACGGAGACTCTAGGGTACAAGATTCATGATGTGGAGGCCAAGTATTATGCGGACGGGGAGGATGCTTACGACATGAGGAAGCAGCTCAAGGGGAAGCAGCACCACCATCATCACCATCACCACCACCACCGTCACGAGCACGGCGGTGGCTGTTGTTCCGGGGAGCCCAAGGGGAATGTTGCAAAAGCCACCTGA 561 0.5882 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQHHHHHHHHHHRHEHGGGCCSGEPKGNVAKAT* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1170 186 CDD NAT_SF 43 110 - -
Gso4g1170 186 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 179 IPR045047 GO:0004596|GO:0006474|GO:0031415
Gso4g1170 186 MobiDBLite consensus disorder prediction 151 186 - -
Gso4g1170 186 Gene3D - 2 174 - -
Gso4g1170 186 MobiDBLite consensus disorder prediction 151 169 - -
Gso4g1170 186 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016407
Gso4g1170 186 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016407
Gso4g1170 186 PANTHER ACYL-COA N-ACYLTRANSFERASE-RELATED 1 179 - -
Gso4g1170 186 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1170 Gso-Chr4 23971677 23972600 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso4g1170 Acetyltransf_1 8.7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1170 K20791 - gmx:100810038 356.681