Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1156 ATGGTTCAAAGAAAGGTGCCTAGCAAGCTTGGCATCGAAGCTGAACATGTTAAATCAGAAAAGAGGTTGGCAAACTCGAAGCTATCTTCATCTCAGCACCAAGATGGAAAAACTAGAGGGGCTGATATGAAGAAGAAAATGAAAAAATCAAGGTCAATAAAGCTTTCTGATCTTGAGGCTCTTCAATCATCATCACCTTCAAGGAGAAGATTGTCACAACCAGGAAAACCACTCCCTCTTCATACTCCAACAACTACAGCATCACCACAGAAGCAGCAACCTTTGTTCAGAACAACAGATGGTTCACCTAATTACATGAAGCCAACAAGCAGTTCACATGCAAAAAAGGAGCTTTTCCCGGTAAGCCACAGGAACACTCAACCTGGTTCTGATTTTAGGAGTCTTCCTAGACAATTTTCCAGTGATTCCAAAGCTTCCTGTGCTAAGAAGCCTGCAAAAGTTTTGACAAGAACATCCAGTTTGAGTTTGGTGAGAACATTGACCAAAACCACTAGTTTCAAGGCTTCTAGAGCTTGTTCTAGAAAATCCACCAGGGCTGTTATGTGTGCAGATATGGGTGCACCACAGAGAGCCACTTGTTCTTCAACTTTGAAGGACTCAAAGTTCCCTGCATACCTCATGCTTAGCCCTGGGGGAACTGAGTCAGAGGGAACTTCAGCCATGAAGGTTTGCCCTTACACATATTGTTCTCTTAATGGTCATCATCATGCTGATTTGCCACCGTTGAAGAGCTTCGTGTCTGCGAGGAGGTTGCTTTTGAAGATGCAGAAGCGTGCAAAGCTTGAAGCTCTCAGCCCTCGGAGACTGAAGGTTCCCCTTGAGACACAGAAGGAGGACTCTGATGCTGAGCAGAATGTCTTTGATGCAAAACCTTCTTGTGATGAAATTGGCATTGATATCTTCATTGAAATCTATGCCAATGAAAAGGATGCAAAACCAACAGCAGCAGAAGAAATGGGGAGAATAGATTTTCTCAAAGAGATTGAGGATCATGAAGATAACAAGTCAACACTTGAGGATAATGGCATAGAAGCCAGTGAGGGTGTCATGCAAATCACTACTTCAAGAAGTATTGGTAATTGTATTCCTTCTCCCTCTATATCTGAGATTGATCTTGAAGAGGATTTGAAAAAATCCTTAGATAATGTTGCAATTGAAGTAGATACCAAAGGAAGCTCTCTCCTAGAACAAAATGAAGGAGGTGCAGATGAAGATTACCAATCTATTGTCTGGTCTCATGAAGAAATGAGCATGGGAAGTTACTGCAGTGATGGGGAACAAGACATGGGGGATGTTGACATGGATGACTCGGATTCCAAAACCTTTGACATGGAGTGGGAGGAGGAGCGGTTGCACGGATTCGATCACGAAGAGGATGCTGATTCTTCTGTGTACTCAGAGGAGGACAATGACTCAAAAGTTGAGTCCTCATCAGAGAGTTCTCATGATGTATCAGTGACATGGTTAGATGATATTCTTGGTGGCTATTATGAGCACTTTCTGGTTGATGAAACACACAAAGAAGCCAATTCAGAAGAAAGCACCTACTTTGAAGAACAACCTAGTGGCATCAATTCTGTCCTTGAAGACACAAATGGAAGCACTGAAACACAAGAAATTGGTTACGACCAACCTTCTTTTACGGAGGAAATATTTGAGTACCTGACAAATGCACAAAATAATGGTGAAGGAGATGAAAAGCATAAGGATGATGATGCGGCCAGTTGCAACACAAAGGCACGTGATGAAGAGACAATTGACAACACTCAATGTCAGAAGATGAGTGAAACTTCCAAAATTGAAGAGACAAATGAAGATGGATACTCAAGTAGCCTAGAGAACAATGATGAGAGCAACAAAGGGGAGAGACAAATTGAGTTGGTGGATGTGTCTAAAGAAAGTAACATAGCTTCTGAAGATCAAGATTTGTTGGAAAAAGACCAAGGCAAAGCTATAGGGTTGCAACAAAGCACAAGTTGCATAAGTGCTGAAGAGGAAAGCACGAGCAAGAATTGGAAAGATGGCATTAGAAGAAAGAAGGGTGTTGAAGATGATGATGATGAAATGAGAAAGTTCAACCCAAAAGAGCCAAATTTTCTGCCATTGGTTCCTGAGCCAGGACAAGAGAAGGTTGACCTGAGGCATCAAATGATGGATGAGAGAAAGAACTCAGAGGATTGGATGCTTGATTGTGCTCTAAGACAAGTTGTGACACAGCTTGCTCCAGCTAGGAAGAAAAAGGTGGCACTGCTAGTTGAAGCCTTTGAAACGGTATTGCCAGCAGCAGCACCCAAATGTGAAACCCGTGTGAGAAACAATTCTCCAGCATTTGGTCATTCAGGAATAATTCAAGCTTGTAGCTGA 2385 0.4231 MVQRKVPSKLGIEAEHVKSEKRLANSKLSSSQHQDGKTRGADMKKKMKKSRSIKLSDLEALQSSSPSRRRLSQPGKPLPLHTPTTTASPQKQQPLFRTTDGSPNYMKPTSSSHAKKELFPVSHRNTQPGSDFRSLPRQFSSDSKASCAKKPAKVLTRTSSLSLVRTLTKTTSFKASRACSRKSTRAVMCADMGAPQRATCSSTLKDSKFPAYLMLSPGGTESEGTSAMKVCPYTYCSLNGHHHADLPPLKSFVSARRLLLKMQKRAKLEALSPRRLKVPLETQKEDSDAEQNVFDAKPSCDEIGIDIFIEIYANEKDAKPTAAEEMGRIDFLKEIEDHEDNKSTLEDNGIEASEGVMQITTSRSIGNCIPSPSISEIDLEEDLKKSLDNVAIEVDTKGSSLLEQNEGGADEDYQSIVWSHEEMSMGSYCSDGEQDMGDVDMDDSDSKTFDMEWEEERLHGFDHEEDADSSVYSEEDNDSKVESSSESSHDVSVTWLDDILGGYYEHFLVDETHKEANSEESTYFEEQPSGINSVLEDTNGSTETQEIGYDQPSFTEEIFEYLTNAQNNGEGDEKHKDDDAASCNTKARDEETIDNTQCQKMSETSKIEETNEDGYSSSLENNDESNKGERQIELVDVSKESNIASEDQDLLEKDQGKAIGLQQSTSCISAEEESTSKNWKDGIRRKKGVEDDDDEMRKFNPKEPNFLPLVPEPGQEKVDLRHQMMDERKNSEDWMLDCALRQVVTQLAPARKKKVALLVEAFETVLPAAAPKCETRVRNNSPAFGHSGIIQACS* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1156 794 MobiDBLite consensus disorder prediction 569 596 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 9 23 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 1 138 - -
Gso4g1156 794 Pfam Plant calmodulin-binding domain 669 767 IPR012417 GO:0005516
Gso4g1156 794 SMART CaM_binding_2 655 767 IPR012417 GO:0005516
Gso4g1156 794 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 794 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 56 71 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 562 645 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 78 111 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 623 645 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 522 537 - -
Gso4g1156 794 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 794 IPR044681 GO:0005516
Gso4g1156 794 MobiDBLite consensus disorder prediction 453 485 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 453 490 - -
Gso4g1156 794 Coils Coil 328 348 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 123 138 - -
Gso4g1156 794 MobiDBLite consensus disorder prediction 514 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1156 Gso-Chr4 21906625 21910646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1156 671 794 Calmodulin-binding Proteins AT2G38800 49.194 3.16e-27 115