Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1148 ATGGCTACGCTGATTGCTCCTTCCAACCACTCTCCTGTGGAAGATGCCGAATCTCTCCGGAAGGCTGTCAAAGGTTGGGGAGCTGATGGAAAAGCCATCATAGCAATACTAGGCCATAGAAATGCCACCCAAAGGACCCTAATCAGAGAAGCATACCAGAATCTCTTCCAAGAGGATCTCATCAAACGCCTTGAGTCTGAGCTCTCTGGTGACTTTGAGAGGGCAATGTACCGTTGGATATTGGAACCTGCAGAACGTGAGGCTTTGTTGGCCAATATAGCCATTAAGAGTGCTGACAAAAACTACCAAGTGATTGTGGAAATTTCCTGTGTCCTTTCACCTGAAGAGCTTTTTGCTGTGAGGCGTGCCTACCACAACAAATACAAGCGTTGCTTGGAGGAAGATGTGGCCGCTAATACCAGTGGCCATCTTCGCCAGCTATTGGTAGGGTTGGTTAGCTCATTTAGGTATGGGGGCAGTGAAATTAATGCAAAATTGGCACAATCTGAAGCTGATGCTCTTCATGAGGCTATAAAAAACAAGAATAAAAGTAATGACGAAATTATTAGGATCCTTACTACTAGGAGCAAGACCCAACTTGTGGCTACTTTCAATCGCTACAGGGATGATCATGGCATTGCCATCACTAAGAAATTGTCCGATGAAGGATCTGATGAATTTCATAAGGCAGCAAATTTAGCCATTAGTTGCATCAATGATCATAAGAAGTACTACGAAAAGGTTCTTCGCAATGCCATGGAACATCTTGGAACTGCTGAGGATGCCCTCACACGTGTGATTGTCACCAGGGCTGAGAAGGACCTGAAGGAGATCAAAGAGGTGTATTACAAGAGAAACAGTGTTCACCTTGAGCATGCAGTGGCCAAGGAAACTTCTGGAGACTACAAGAAGTTCCTCCTCTCTTTGATGGGGAAAGAAGAGTAA 945 0.4497 MATLIAPSNHSPVEDAESLRKAVKGWGADGKAIIAILGHRNATQRTLIREAYQNLFQEDLIKRLESELSGDFERAMYRWILEPAEREALLANIAIKSADKNYQVIVEISCVLSPEELFAVRRAYHNKYKRCLEEDVAANTSGHLRQLLVGLVSSFRYGGSEINAKLAQSEADALHEAIKNKNKSNDEIIRILTTRSKTQLVATFNRYRDDHGIAITKKLSDEGSDEFHKAANLAISCINDHKKYYEKVLRNAMEHLGTAEDALTRVIVTRAEKDLKEIKEVYYKRNSVHLEHAVAKETSGDYKKFLLSLMGKEE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1148 314 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 Pfam Annexin 247 309 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 Pfam Annexin 170 230 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 Pfam Annexin 90 151 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 SUPERFAMILY Annexin 3 312 IPR037104 GO:0005509|GO:0005544
Gso4g1148 314 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Gso4g1148 314 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Gso4g1148 314 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Gso4g1148 314 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Gso4g1148 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Gso4g1148 314 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Gso4g1148 314 SMART annex3 182 235 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 SMART annex3 257 309 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 ProSitePatterns Annexin repeat signature. 257 309 IPR018252 GO:0005509|GO:0005544
Gso4g1148 314 PRINTS Plant annexin signature 118 132 IPR009118 -
Gso4g1148 314 PRINTS Plant annexin signature 160 180 IPR009118 -
Gso4g1148 314 PRINTS Plant annexin signature 225 243 IPR009118 -
Gso4g1148 314 ProSiteProfiles Annexin repeat profile. 165 236 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 ProSiteProfiles Annexin repeat profile. 240 311 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 Gene3D Annexin 242 312 IPR037104 GO:0005509|GO:0005544
Gso4g1148 314 PANTHER ANNEXIN 6 314 - -
Gso4g1148 314 Gene3D Annexin 165 239 IPR037104 GO:0005509|GO:0005544
Gso4g1148 314 PANTHER ANNEXIN 6 314 - -
Gso4g1148 314 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Gso4g1148 314 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1148 Gso-Chr4 21107430 21110134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1148 K17098 - gmx:100813609 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1148 4 21107430 21110134 Gso15g1982 15 44758624 44761279 PCT
Gso4g1148 4 21107430 21110134 Gso11g2304 11 38981893 38984429 PCT
Gso15g1982 15 44758624 44761279 Gso4g1148 4 21107430 21110134 PCT
Gso11g2304 11 38981893 38984429 Gso4g1148 4 21107430 21110134 PCT