LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso4g1134	ATGGAAACAATCCCAAAGCTGTTAGAGCATGAGATAGATATGAGTTCATTATATGTATTTTCAATGCCTTCTCCACCGCCACCTCCTCCACCACTTCCTGTTGAGAGGGTGATTGTTGAACCAACCTTATTCCACAAAGAGGCTAACATCAATCCTCCCAAAAAAAGTCCAGTTCCTCCCACTTTTGCAAAAACTTTCACCATCGCATCCCTTCAACAGTGTACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGCATGCTGGGGAGTGTGTATAGGGCAGAGCTTCCAGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAACAGATGATGAGTTTCTCGAATTGATAAACAGTATTGACAGAATCCGACATCCAAATATTGCTGAGCTTATTGGGTACTGTGCAGAGCATGGCCAAAGGCTTCTTATTTATGAGTATTGCATTAATGGGTCGTTGGAGGATGCACTCCATTCAGATGATGAATTCAAAACAAGATTGTCATGGAATAGTAGGTACAAGTAA	549	0.408	METIPKLLEHEIDMSSLYVFSMPSPPPPPPPLPVERVIVEPTLFHKEANINPPKKSPVPPTFAKTFTIASLQQCTNSFSQDNLIGLGMLGSVYRAELPDGKILAVKKLDKRVSDHQTDDEFLELINSIDRIRHPNIAELIGYCAEHGQRLLIYEYCINGSLEDALHSDDEFKTRLSWNSRYK*	183

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso4g1134	182	PANTHER	OS01G0253100 PROTEIN	27	181	IPR045271	GO:0004714\|GO:0006468
	Gso4g1134	182	SUPERFAMILY	Protein kinase-like (PK-like)	54	180	IPR011009	-
	Gso4g1134	182	PANTHER	PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED	27	181	-	-
	Gso4g1134	182	Pfam	Protein kinase domain	79	172	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso4g1134	182	ProSiteProfiles	Protein kinase domain profile.	78	182	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso4g1134	182	Gene3D	Phosphorylase Kinase; domain 1	44	155	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso4g1134	Gso-Chr4	20046374	20047850	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso4g1134	10	182	Strubbelig Receptor Gene Family	AT2G20850	55.172	8.55e-57	187

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Gso4g1134		Pkinase	2.8e-14	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso4g1134	-		-	gmx:106798640	349.362