Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1113 ATGTCATGGTTGCAAACTAAGGGTGCTTTTCCATTAGGCCCAAAGCAGCACTTCCTTCAACATTTGGGTGTTCAAGCTGCTGGTCTTACAGGAAGAAGTCATGTCTATAGCTTTGGAGTGGTGCTGCTACAATTACTAACAGGGAGAAGGCCAGTGGGGAATTTTGGGGAAGAAGGTCTAGACATTGTTCAATGGACCAAGTTGCAAAAAAATTGCAGCAATGACAAGGTGGTGAAGATTCTTGATGAGAGGCCATGTCACATTCCCTTAGATGAAGCAAAGCAGGTATACTTTGTGGCCATGCTATGTGTTCAGGAACAAAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGTAATGCTTGCGCAAGCAAAGAAAGCAAACACATTCCAAAAGCACTTACCCAGAAAAGTAGCAGATAAGCTCATTGGAATCCAGCGCAGCTTTTTATGGGGAGAAGGGTCGGAGCAAAGGAAAATAGCGTGGGTCAAATGGGAAACTATCTGCCTCCCAAAACAAAAAGGGGGCCTGGGTATAAAAGACATAAGGACCTTCAACAAAGCTCTTCTTGGGAAGTGGAGATGGGATTTGTTTCACCAAAGCAAGGAGTTGTGGGCCAGAATATTGGCTTCTAAGTATGGTGGGTGA 648 0.4506 MSWLQTKGAFPLGPKQHFLQHLGVQAAGLTGRSHVYSFGVVLLQLLTGRRPVGNFGEEGLDIVQWTKLQKNCSNDKVVKILDERPCHIPLDEAKQVYFVAMLCVQEQSVERPTMREVVVMLAQAKKANTFQKHLPRKVADKLIGIQRSFLWGEGSEQRKIAWVKWETICLPKQKGGLGIKDIRTFNKALLGKWRWDLFHQSKELWARILASKYGG* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1113 215 Pfam Protein tyrosine and serine/threonine kinase 28 120 IPR001245 GO:0004672|GO:0006468
Gso4g1113 215 Gene3D Transferase(Phosphotransferase) domain 1 17 141 - -
Gso4g1113 215 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 32 130 - -
Gso4g1113 215 PANTHER UNNAMED PRODUCT 32 130 - -
Gso4g1113 215 SUPERFAMILY Protein kinase-like (PK-like) 29 125 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1113 Gso-Chr4 18791753 18793266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1113 32 126 Receptor kinase-like Gene Family AT5G65700 57.895 8.38e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso4g1113 PK_Tyr_Ser-Thr 4.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1113 - - gmx:102669613 440.269