Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso4g1102 | ATGGCATTCAGCGATAAGCAAAAGCAAGAAGAAGAAGAAGAACCGCACAGAATGGAAGAAGACGACGACGAAAGCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGTGGGACGATTGGGAAGGAGAAGACGAAGGAGAGAGAGAATCTGAATTCGTGTGTCTATTCTGTGACTCCCGGTACAGTTCGTGCGGTTCCTTGTTCGACCACTGCGCCTCCCTTCACCGCTTTGATTTCCACACGATCAGAACAACTCTCAGCTTGGATTTCTATGCCTCCTTCAAGCTCATTAACTTCATCCGCTCTCGGGTGGCAGAGAACATATGTTGGAGTTGTGGATTAACATGCCAGTCCAACTGTGACCTTCAGAATCATTTGCATGATGTAGTTGACTTTAATGAGATAAAGACTTTGTGGAATGATGATAGGTATCTGATACCTTTCATGCAAGATGATTCACTGTTGTACAGTTTTGGTGATTGTGACGAAGACGGGGAAGATGAACATATTACTCGAATTGATGAAGATCTTATAAAGGATCTAATGAACATTGAAGAGAGTATCCATGACGATCAAGATCTTGTGAAAAAAGTGGTAGTTGATGATGACAAACATGAGATTGATTCTGTCTCTAATAATCATTTGAACAAGGCTAGTTCTTCAAAGAAACTTATTAATGGTAAGGACTCAAAAGGACATGTTTTGTGCAGTGATAAGGATCCAGAAGGACATTTGATGGTTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGATCAATGAAAGTTATTTTGGGTCTTACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCGATTTTGAAGAATCCCTCTCTACTAAATAGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATTCTCAGCCTATTTTCAGCAAAAGCTGGTGCTTCAAGGGTTATTGCAGTTGAGGCTAGTGCCAAGATGGCAGCAGTAGCATCTCAGGTTGCAAAAGATAATGGTCTTTTGCTGAGTAAAAGCCAAAATGGAGTTGATGGCCTCCAAAAGGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCGCAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGAGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGATACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCTTTTTGGGAAAATGTGTGTGATTTCGACATGTCTTGCATTGGGAATGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCTGTTCTGCTATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTACTTCTGGAACATGCTGCTGGTGTTATGGTGTTGTCCTATGGTTTGATACTGGATTTTCAAGCAGATTCTGCCGAGAAACACCAGCCGTGTTATCCACATCCCCTTACATGCCAAGAACACATTGGTCACAAACAATCTTAACCTTTCAAGAACCTATTGCGATGGGATTTGGAAAAGAAAACAGGGGTAAACCAGAAGCAATTGGCACTGAGGTGTATCCTGCTGTGAAGATTGATTTACGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATTGATATATCCTTAGAAGCTGCTGGTGTTGGTCCTGACAGTCACAAACGCAGTTGGCCTGCTCAGCTTTTTAATCTGCAGTAG | 1905 | 0.4178 | MAFSDKQKQEEEEEPHRMEEDDDESEEEEEEEEEEEEEEEEEVWDDWEGEDEGERESEFVCLFCDSRYSSCGSLFDHCASLHRFDFHTIRTTLSLDFYASFKLINFIRSRVAENICWSCGLTCQSNCDLQNHLHDVVDFNEIKTLWNDDRYLIPFMQDDSLLYSFGDCDEDGEDEHITRIDEDLIKDLMNIEESIHDDQDLVKKVVVDDDKHEIDSVSNNHLNKASSSKKLINGKDSKGHVLCSDKDPEGHLMVNSQNHIAKHIKKINESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNSAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQVAKDNGLLLSKSQNGVDGLQKGVIEVVHGMVEEIDKTVELQPRSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCDFDMSCIGNELVIDAARIPIVDVVDSQDLVTCSAILQSFDLATMKPNEVDFTATATLELKPSTSGTCCWCYGVVLWFDTGFSSRFCRETPAVLSTSPYMPRTHWSQTILTFQEPIAMGFGKENRGKPEAIGTEVYPAVKIDLRVSIVRSTEHRSIDISLEAAGVGPDSHKRSWPAQLFNLQ* | 635 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso4g1102 | 634 | Gene3D | - | 431 | 628 | - | - | |
Gso4g1102 | 634 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 274 | 575 | IPR029063 | - | |
Gso4g1102 | 634 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED | 32 | 633 | - | - | |
Gso4g1102 | 634 | Coils | Coil | 16 | 43 | - | - | |
Gso4g1102 | 634 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 61 | 82 | IPR013087 | - | |
Gso4g1102 | 634 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 268 | 586 | IPR025799 | GO:0016274|GO:0018216 | |
Gso4g1102 | 634 | Gene3D | Vaccinia Virus protein VP39 | 260 | 429 | IPR029063 | - | |
Gso4g1102 | 634 | Pfam | Methyltransferase domain | 310 | 425 | IPR041698 | - | |
Gso4g1102 | 634 | SUPERFAMILY | beta-beta-alpha zinc fingers | 39 | 178 | IPR036236 | - | |
Gso4g1102 | 634 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Gso4g1102 | 634 | CDD | AdoMet_MTases | 310 | 428 | - | - | |
Gso4g1102 | 634 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 32 | 633 | IPR025799 | GO:0016274|GO:0018216 | |
Gso4g1102 | 634 | MobiDBLite | consensus disorder prediction | 15 | 51 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso4g1102 | Gso-Chr4 | 18193547 | 18198782 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso4g1102 | 32 | 633 | C2H2 Transcription Factor Family | AT3G12270 | 55.769 | 0.0 | 659 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso4g1102 | K11436 | - | gmx:100781879 | 1165.6 |