Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1100 ATGTACGGGAGTAAAGCTAGTCAACTTGTGAAAGAATTTGCAAGTGGAGAAAAAGGTCAGCTTACCACATACAATAATGACTTGATTCGAGAAGTAGTTGCAGAGTGTACTCAACATCACCTTGATTTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATATCCAAACGGCAAAAAATGCAGATCACTATGGAGCCCTTATCCACCATCTTGCTGTAGTCCGAAATAAACGTTGCCTAATGGCCTATATGTATAATCGAGCAGAAATTATACGAAACTTGTTATGGAAGATAGGGCATGTGCTTCCTCAAGAAATTAAAGTGAAGCTTTGTAATACGGAGGAAGAACATTTCAAGAATCATTCTAAAGCACTGAAAAATTATATGTTGAAAGTGGAGGTTGATTTGACTGTGGATATGGTACCGCCAAAAGATCCATACATCAAAGTGAGGGTCATTGATGACATTGGAGAAGGCATTCTGCTCAGTGATGATAAGAGTGCCAATTTTGCCCTCCATTCAATGCACCTTCTGAAGCGAACTGATGCAGAGCAATTTATCGCACAGGGAAAAATGGAAGAGCTCACGGGTTGA 600 0.4017 MYGSKASQLVKEFASGEKGQLTTYNNDLIREVVAECTQHHLDFQSLIRKMQEEGLDIQTAKNADHYGALIHHLAVVRNKRCLMAYMYNRAEIIRNLLWKIGHVLPQEIKVKLCNTEEEHFKNHSKALKNYMLKVEVDLTVDMVPPKDPYIKVRVIDDIGEGILLSDDKSANFALHSMHLLKRTDAEQFIAQGKMEELTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1100 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
Gso4g1100 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Gso4g1100 199 CDD GINS_A_psf1 3 135 IPR005339 GO:0000811|GO:0006260
Gso4g1100 199 Gene3D - 1 133 - -
Gso4g1100 199 Pfam GINS complex protein 40 105 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1100 Gso-Chr4 18015882 18019494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1100 1 199 Core DNA Replication Machinery Family AT1G80190 66.832 5.66e-99 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1100 K10732 - gmx:100780798 402.134