Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1097 ATGACACAAGAAAAAGATTTGTATAAATGGCATGGAAATCTTTTTGGCGGCCAAAATTGCAAACAGCCCCAAGGGTCGTCGTCATCATCAATACCAACAATGGAGGAAGATATTGACAAAGCTGCTGAAGCACTCGTTTCTTTGGTAACTTCATACCAAGAGGTAAAACATAATTTGCCACCACACGAGAACCTCAGAGACTATATTTTAGAGTATGGTGAGCCTCTCAAGAAGGTATTGACAAATACTGATGTGAATGTAAATCAAAATAGGATTTTTCTCAAAAAAGAGCATGTGGAAAAGTCTTTCTTACCGTTATTGAGGAATGATGAAAATATTGAAGAAGGAATACGAGTTTGTGCCTATGACATGCATGACAATAGTTACACTCTAATGTTCAAGAAATGGACAAAGAAGTTTTATGTGCTTAACGGTGAGTGGAAAAAATTCTTCCAAATTCATGAATTGCAAAAGAACGATGTTGTCACGGTGTGGATATTTCGTCATTCAAAAAGCAACAAGGTATGTTTCGCTCTTGCATATCAAAAGATTGAAAGGTAA 561 0.3636 MTQEKDLYKWHGNLFGGQNCKQPQGSSSSSIPTMEEDIDKAAEALVSLVTSYQEVKHNLPPHENLRDYILEYGEPLKKVLTNTDVNVNQNRIFLKKEHVEKSFLPLLRNDENIEEGIRVCAYDMHDNSYTLMFKKWTKKFYVLNGEWKKFFQIHELQKNDVVTVWIFRHSKSNKVCFALAYQKIER* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1097 186 CDD B3_DNA 76 173 IPR003340 GO:0003677
Gso4g1097 186 ProSiteProfiles B3 DNA-binding domain profile. 77 183 IPR003340 GO:0003677
Gso4g1097 186 PANTHER B3 DOMAIN PLANT PROTEIN 40 185 - -
Gso4g1097 186 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 40 185 IPR005508 GO:0003677
Gso4g1097 186 SUPERFAMILY DNA-binding pseudobarrel domain 77 172 IPR015300 -
Gso4g1097 186 Gene3D - 74 182 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1097 72 183 B3 DNA Binding Superfamily AT4G03170 39.474 5.30e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1097 - - gmx:121174747 386.341