Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1085 TTATTTCCTCTTTTCTGTTGCATTTTCCTTCCTAGCACTCCCACTAGAGTGGAGACACCTGATGTTATTGACCTTCGTAAGCAGCAGAGGAAGGAACCTAAAAAGCCTCTTTATCAAGTACTTGAAGAGAAGAAGGAAAAAATTGCTCCAGGAACTTTGCTTGGAACTACACACACTTATGTGGTTAACACTGGCACCCAGGACAAGTCAGGGGCTAAAAGGATTGATTTACTTAGAGGACAAAAGTTATATAAAGTAGATGTCACTTTACTGCCACAAGAGTTGGATGCCATGGAAAATGTTTTACCCGCGAAGTATGAAGAAGCAAGGGAGGAAAAGAAGTTACGAAATCAGTGTGAGGATTCTAGTGACATGGTGGCAAAGGCTCGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAAGATTTGGTCCCTGGTTTTAATAAGGTTGTAGGAGCTGCCATCATCTTTGAGGTGCAAAGAAGTTCAAGATCAGAAGCAAGAAAAGAAGAATTACGTAGACGGGAGATACATGTTGTCTTCTTGCCTTTCTCTGTCATAGATTATATGTTTTGA 579 0.4024 LFPLFCCIFLPSTPTRVETPDVIDLRKQQRKEPKKPLYQVLEEKKEKIAPGTLLGTTHTYVVNTGTQDKSGAKRIDLLRGQKLYKVDVTLLPQELDAMENVLPAKYEEAREEKKLRNQCEDSSDMVAKARREKISERMKILQDLVPGFNKVVGAAIIFEVQRSSRSEARKEELRRREIHVVFLPFSVIDYMF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1085 192 Coils Coil 112 132 - -
Gso4g1085 192 PANTHER SPLICING FACTOR 3B 10 134 - -
Gso4g1085 192 PANTHER SPLICING FACTOR 3B SUBUNIT 2-LIKE 10 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1085 Gso-Chr4 17530209 17534162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1085 116 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 63.636 3.76e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1085 K12829 - gsj:114410634 379.793