Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1067 ATGGGTTCTAATAGGCCACTTCTAATGACAGTACCATCTCCAACAACAACTTCTAGCACCTCTATTGATCCTGAGCTTCCAAAATCAAAGTCAAGTTCCAGCAATAACGCCTTCAACCCTTTTGAGAACACTCTCAACAACTCATCATCATCACGCAGAAGTTCTGGGAGCAGGAGCAACAACTCTATCCATGAAGTGAGTTTGAGCAGTTCAGGGTCCATTAAATCCAAACCTGTGAGGTATGGCTCAAAGGGTGGTGCAGATTCTGAAGGACTCAGCATGTCACAAAGGGAGCTCAGAGATGAGGATGCAAGGTTAGTGTACATAAACGAACCTTTCAAAACAAACGAGGCTTTTGAGTTTGCAGCGAACTCAATCCGCACAAGCAAATACTCCCTCCTCACTTTCATTCCAAGGAACCTCTTTGAACAATTCCACAGGGTTGCTTACGTGTACTTCCTCATAATTGCAATTCTCAACCAACTTCCTCAGCTTGCAGTGTTTGGAAGAACTGTTTCCATCTTGCCACTGGCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGTGTATGAGGATTGGAGAAGGCACCAGAATGATAAAGTTGAGAACAATAGGTTAGCATCAGTTATGGTTGATGGAGGAAGAAGCTTTGTGGAGAAAAAATGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCAAGGCAAATGAGACTATCCCTTGTGATACTGTGTTGCTCTCAACTAGTGATCCAACTGGAGTTGCATATGTGCAGACTATTAATCTTGATGGTGAGTCCAATTTGAAGACAAGGTATGCAAAGCAAGAGACACATGGTAAGGAGGGGTTTGGTGGGGTGATTAAGTGTGAGAAACCCAATAGGAACATTTATGGATTTCTTGCTAACATGGAAGTTGATGGCAAGAAGTTGTCTCTTGGGTCCTCTAATATTGTGCTTAGAGGATGTGAACTCAAGAATACTAGTTGGGCTATTGGTGTTGCTGTGTATTGTGGGAGTGAGACCAAGGCTATGCTGAATAACTCAGGAGCTCCTTCTAAGAGGAGCCGGTTGGAGACACGCATGAATTCTGAGATCATTTGGCTCTCTTTCTTCCTTGTGGCATTGTGTACAGTCACCTCAGTTTGTGTTGCGGTGTGGCTGAAGCGCCACAAGGATGAGTTGAATCTGTTGCCTTATTATAGGAAACTTGACTTTTCAGAAGGGGATGTGGATAGCTATGAGTACTATGGATGGGGGTTGGAAATTTTCTTCACATTTCTCATGTCAGTTATAGTGTTCCAAGTGATGATTCCCATTTCCTTGTACATTTCCATGGAGCTTGTGAGGGTTGGTCAGGCCTACTTTATGTTCCAAGACAAGAGAATGTATGATGAGGCAACAAAGTCAAGGTTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCAGACAAAACCGGCACTCTCACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTAAAGAGAACAACAGCATGGAGAGGGATGAGGTAGTTGAACATTCTGTGGAAGTGGATGGAAAGGTCTTCAGACCAAAAATGAAGGTGAAAGTCAATCCAGAGCTTTTGCAGCTATCAAGAAGTGGACTTCAAAATGTGGAGGGAAAACGGATTCATGATTTCTTTCTAGCAATGGCAACCTGCAACACTATTGTGCCTCTTGTTGTTGACACACCAGACCCTGATGTCAAGCTGATAGATTACCAAGGAGAATCTCCAGATGAACAAGCATTAGCTTATGCTGCCGCCGCCTATGGTTTTATGCTCACAGAAAGAACCTCTGGCCATATAGTCATTGATATTCATGGACAAAGACAAAAGTTCAATGTCTTGGGTTTACATGAATTTGACAGTGACAGGAAGAGAATGTCAGTTATATTGGGGTACCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATAGACAGGTCATTTAAAATGGACTTAGTAAGAGCCACTGAAGCACATCTTCACTCTTACTCTTCTATGGGTTTGAGGACACTTGTTATTGGCATGAGAGACTTGAATGCTTCAGAATTTGAGCAATGGCATGGATCCTTTGAGGCAGCAAGCACTGCTGTGTTTGGCAGGGCTGTGATGCTTCACAAGGTTTCGAGCATTGTAGAAAACAATCTCACCATATTGGGAGCATCTGCCATTGAAGATAAGCTGCAACAATGTGTGCCTGAATCCATTGAGTCTCTAAGGATTGCAGGCATTAAAGTATGGGTTCTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCAACATGACTCAGATTATAATCAATAGCAAGAACAGAGAATCATGCAGAAAAAGTTTACAAGATGCCCTTGTCATGTCTGAAAAGCTCATGTCCACATCCGATGTTGCAAACAATGCTGGAGGAAGTTCACATGCAACTCCAGTAGCCTTGATTATCGATGGTACCAGCCTTGTGCATATTCTTGACAGTGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGCCGAGTTGCTCCGCTGCAAAAGGCAGGGATTGTTGCCCTTGTGAAGAATAGGACATCTGACTTGACACTAGCTATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTTTTATTGATACATGGTCACTGGAATTACCAACGGCTCGGTTATATGATACTGTACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTGGCAGCATTGCTTCCACGTTTGGTTGTAAGATTTGTTTATCAATATTATTTTCCTAATGATATTCAAATTTGTAGAGAAGCTGAGAAGATTGGGTATGAGAGAGTTGTTGAAAGTGGACACATAGAAATGCTTCCTATCTAA 3153 0.4247 MGSNRPLLMTVPSPTTTSSTSIDPELPKSKSSSSNNAFNPFENTLNNSSSSRRSSGSRSNNSIHEVSLSSSGSIKSKPVRYGSKGGADSEGLSMSQRELRDEDARLVYINEPFKTNEAFEFAANSIRTSKYSLLTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRTVSILPLAFVLFVTAVKDVYEDWRRHQNDKVENNRLASVMVDGGRSFVEKKWRDVRVGEVIKIKANETIPCDTVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNNSGAPSKRSRLETRMNSEIIWLSFFLVALCTVTSVCVAVWLKRHKDELNLLPYYRKLDFSEGDVDSYEYYGWGLEIFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMFQDKRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSKENNSMERDEVVEHSVEVDGKVFRPKMKVKVNPELLQLSRSGLQNVEGKRIHDFFLAMATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLTERTSGHIVIDIHGQRQKFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIDRSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHGSFEAASTAVFGRAVMLHKVSSIVENNLTILGASAIEDKLQQCVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIIINSKNRESCRKSLQDALVMSEKLMSTSDVANNAGGSSHATPVALIIDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDLTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWAFFDAAGTGLFWLLLLGIIVAALLPRLVVRFVYQYYFPNDIQICREAEKIGYERVVESGHIEMLPI* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1067 1050 Gene3D - 595 728 IPR023299 GO:0000166
Gso4g1067 1050 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 495 759 IPR023299 GO:0000166
Gso4g1067 1050 Gene3D - 182 346 - -
Gso4g1067 1050 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Gso4g1067 1050 PRINTS P-type cation-transporting ATPase superfamily signature 908 927 - -
Gso4g1067 1050 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 983 1050 - -
Gso4g1067 1050 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 16 984 - -
Gso4g1067 1050 SUPERFAMILY Calcium ATPase, transduction domain A 211 343 IPR008250 -
Gso4g1067 1050 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 121 985 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso4g1067 1050 CDD P-type_ATPase_APLT_Dnf-like 124 1013 - -
Gso4g1067 1050 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Gso4g1067 1050 Pfam Cation transport ATPase (P-type) 595 674 - -
Gso4g1067 1050 Pfam E1-E2 ATPase 215 447 - -
Gso4g1067 1050 SFLD Haloacid Dehalogenase 473 959 - -
Gso4g1067 1050 MobiDBLite consensus disorder prediction 1 77 - -
Gso4g1067 1050 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 16 984 - -
Gso4g1067 1050 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 983 1050 - -
Gso4g1067 1050 SUPERFAMILY Calcium ATPase, transmembrane domain M 121 987 IPR023298 -
Gso4g1067 1050 SUPERFAMILY HAD-like 484 963 IPR036412 -
Gso4g1067 1050 Pfam Phospholipid-translocating P-type ATPase C-terminal 936 987 IPR032630 -
Gso4g1067 1050 MobiDBLite consensus disorder prediction 1 96 - -
Gso4g1067 1050 SFLD p-type atpase 473 959 IPR044492 -
Gso4g1067 1050 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 421 511 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso4g1067 1050 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 879 994 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso4g1067 1050 Pfam Phospholipid-translocating ATPase N-terminal 107 173 IPR032631 -
Gso4g1067 1050 Gene3D - 747 948 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1067 Gso-Chr4 17117953 17123869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1067 50 984 Primary Pumps ATPases AT5G04930 69.468 0.0 1354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1067 K14802 - gmx:100813982 1874.75