Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1039 ATGATGACAACAGAAGCTGAGACTGAGAGGGTGGTGGTGATCCAGGATGCATCAAGAGATGTTAATTCAAATGCAATCCTAGGGGCCCTGGAATGGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATGAGCAGTCCTATGGGTTACATGGTCAGAGTTGATTCCAGTTCAATGATTTCAACAAACAAGAAAATAATTGAAAAAAGGCTTACCAAAAAAAAGGAAGAATATCTTATGAACCAGAACATCCAGGAGATCTCCAACTACTGTAAATTGAATGAGATTGGATTCCAATTAGAAGTGCTTGTAGGCTCTACTGCAGAGGTTGCTTCTAATGCTGCCAAGGAATTTCAAGCGACAAGGTTGATACTAGTTAGACAAATTCACAAAGATATGAAGCATTTCGTGCGCAACCTCCCTTGTGGTATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAGCAGTCAGTACCAAAACATTTGCCCTCAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAGGAACGTTCTCTTCTGATGTCCAGGTCTTCATCTAGTGATCTGTTGACATCAACTGGAATTTCAAGTCAGTGGAGTACAGAGGTCTCCACTTCTAGTTTCGGAAGCTTGCGGTATGGTTGTCAATACCAAGAGGGAAAGTTTTATTCAAATAAAGAACAAGAAACAACAGGGAATCAATCACTGTTTCACATTTCGGAGAATGAAGAGACGAGCCAATTACAAGTAAATAAAAAAGAGCAGCATAGTAGAAATAATGAAACATCTCATATGGAGGAAGAATTTACAAATCCACTTTGTCTTGTGTGCAAAAATAGACGACCAAACATTGGATTGAAGAGAGATTTCAGTTATGCTGAGCTCCATACTGCTACACAAGGATTTTCTCCGAAGAACTTTCTGTCAGAAGGTGGATTTGGATCTGTCTACAAAGGACTGCTGAATGGAATGAAGATTGCTGTTAAGCAACATAAATATGCAAGCTTCCAAGGAGAGAAGGAATTTAAGTCTGAAGTGAATGTACTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGTTCATGCTCAGAAAAAAATAATAGGCTTCTTGTGTATGAATATGTCTGCAATGGCTCACTTGACCAACATCTATCAGAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAATGTAGCTATTGGAGCTGCCAAAGGCTTACTATACTTGCACAAGAACAACATGATACACAGAGATGTGAGACCAAACAATATCCTTATAACACATGATTATCATCCATTGCTGGGAGACTTTGGATTAGCAAGAAATCAAAATCAAGACTCGATACACTCAACGGAAGTTGTTGGAACTTTGGGGTATTTGGCTCCAGAATATGCAGAACTTGGCAAAGTGTCTACCAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTGCAACTAATAACAGGAATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGCGAGGCCACTTTTAAGAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTAACTCTCATGATGTCCATCAACTATTTTGGATGGTTCGAATAGCAGAGAAATGTCTAAGCAGGGAGCCTCAGAGGAGACTAAATATGATTCAGGTTGTTGATGCTCTAACTGACATAGTGGAGGGCAGAACATGTGACATAATACTAAGGGATTACTCCCCTGCAAGATCAGATTCAACCTATAGTGCATCAGACTCTGATGAATCTGAAGACGAAATGCAGGAACCCTTGAGGTTTGAAAGCGAGTTACTAAGTCACAGTTCAGAATCCATAGAAAGTAACAACATAAGTCAGATGATGCACATGATTGTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCTCTTCGTCTAGCTCAAGCTCATATAAGCTTCATTATGAGTCAACTAGTGATGGTGAAGCACACAATGAAGGGGAAATAGAAATATCAAATTCCAATTGGGGGTTACTCAATTCTTAG 2100 0.3957 MMTTEAETERVVVIQDASRDVNSNAILGALEWFSVKAGDQLIIVAILDWMSSPMGYMVRVDSSSMISTNKKIIEKRLTKKKEEYLMNQNIQEISNYCKLNEIGFQLEVLVGSTAEVASNAAKEFQATRLILVRQIHKDMKHFVRNLPCGMYRITSDNSIERLKDPKSAVSTKTFALRQENVSYKEMFPGSEEEERSLLMSRSSSSDLLTSTGISSQWSTEVSTSSFGSLRYGCQYQEGKFYSNKEQETTGNQSLFHISENEETSQLQVNKKEQHSRNNETSHMEEEFTNPLCLVCKNRRPNIGLKRDFSYAELHTATQGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKYASFQGEKEFKSEVNVLSKARHENVVVLLGSCSEKNNRLLVYEYVCNGSLDQHLSEHSRSPLSWEDRINVAIGAAKGLLYLHKNNMIHRDVRPNNILITHDYHPLLGDFGLARNQNQDSIHSTEVVGTLGYLAPEYAELGKVSTKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLRERNYPDLIDERIINSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDIILRDYSPARSDSTYSASDSDESEDEMQEPLRFESELLSHSSESIESNNISQMMHMIVRQPPSPPIQSISSSSSSSYKLHYESTSDGEAHNEGEIEISNSNWGLLNS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1039 699 ProSiteProfiles Protein kinase domain profile. 320 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1039 699 PANTHER OS01G0253100 PROTEIN 12 611 IPR045271 GO:0004714|GO:0006468
Gso4g1039 699 ProSitePatterns Tyrosine protein kinases specific active-site signature. 436 448 IPR008266 GO:0004672|GO:0006468
Gso4g1039 699 Pfam Protein tyrosine and serine/threonine kinase 324 581 IPR001245 GO:0004672|GO:0006468
Gso4g1039 699 Gene3D Phosphorylase Kinase; domain 1 293 394 - -
Gso4g1039 699 Gene3D Transferase(Phosphotransferase) domain 1 395 595 - -
Gso4g1039 699 PANTHER TYROSINE KINASE FAMILY PROTEIN 12 611 - -
Gso4g1039 699 SMART tyrkin_6 320 582 IPR020635 GO:0004713|GO:0006468
Gso4g1039 699 MobiDBLite consensus disorder prediction 602 623 - -
Gso4g1039 699 MobiDBLite consensus disorder prediction 652 699 - -
Gso4g1039 699 SUPERFAMILY Protein kinase-like (PK-like) 304 582 IPR011009 -
Gso4g1039 699 MobiDBLite consensus disorder prediction 655 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1039 Gso-Chr4 15950347 15957034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1039 308 588 Trihelix Transcription Factor Family AT5G38560 46.000 4.19e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso4g1039 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1039 - - gmx:100794450 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1039 4 15950347 15957034 Gso6g2572 6 47478172 47489703 GST