Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1033 ATGAAAACAGGGCAGCAGGTGGCCATAAAGGTGGTGGGAAAAGAAAAGGTGATAAAGGTCGGAATGATAGAGCAGGTGAAGAGGGAGATCTCGGTGATGAAGATGGTGAAGCACCAAAACATCGTCGAACTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTATATTGTCATGGAACTCGTCCGCGGCGGAGAGCTCTTCCACAAGGTCTCTAAAGGCCGCTTAAAGGAGGACGTGGCAAGACTCTACTTCCAGCAGTTAATCTCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGTGACCTCAAGCCGGAAAACCTCCTCCTGGACGAACACGGCAACCTCAAAGTCTCCGACTTTAGACTCATCGCTTTCTCCGAACACCTCAAGGAGGACAGGCTGTTACACACCACGTGCGGCATGCCTGCGTACGTGTCGCCTGAAGTGATAGTGAAAAAAGGCTATGACGGTGCCAAGGCTGATATATGGTCATGTGGTGTAATCCTCTACATTCTCCTCACAGGCTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGATAATTTGGTGGGGTTAA 585 0.5077 MKTGQQVAIKVVGKEKVIKVGMIEQVKREISVMKMVKHQNIVELHEVMASKSKIYIVMELVRGGELFHKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFRLIAFSEHLKEDRLLHTTCGMPAYVSPEVIVKKGYDGAKADIWSCGVILYILLTGFLPFQDDNLVAMIIWWG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1033 194 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1033 194 SUPERFAMILY Protein kinase-like (PK-like) 2 192 IPR011009 -
Gso4g1033 194 Gene3D Transferase(Phosphotransferase) domain 1 1 191 - -
Gso4g1033 194 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1033 194 Pfam Protein kinase domain 2 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g1033 194 PANTHER - 2 194 - -
Gso4g1033 194 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 194 - -
Gso4g1033 194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1033 Gso-Chr4 15519306 15519890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g1033 1 189 CBL-interacting serine-threonine protein kinases AT4G30960 82.540 7.59e-107 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso4g1033 Pkinase 3.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1033 - K07198 gmx:100789180 374.015