Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g1016 ATGTCATTTGGCTTGCAGTTTGCATTGATGCAAACATTCTCTGCAACCTTGATAGACGAAGATCAGTGGATGTATGATTGTGTAATGTCCGAAGAAGTTTATATGAATGACCAAAATGAAGACGAAGGTGGAATGAATGAAGAACATGTGTTTGCTACCCATGATGATGTTCTGCAATGGGCTCAATTTGTTGCTTATGAAATTGGATTTGTGGCGGTGATTATGAGATCAAACACAAAAAATGGTATTAGAGGAAGGACCTCATTTATTTTAATTGGCTGTGAAAGGAGTGGTCAGTATAGGGCCAAGAAGAAGGATTTGGTAAGAACATGTACTGGTAGTAGAAAATGTGGGTGTCCATTTAAGCTACGTGCAAAACCAGTTGTAGGGGGTGAAGGATGGATGGTGAATTTAATCTGTGGGAGGCACAATCATGAATTGGCAAAGTCTTTAATTGGGCATCCATATGTCGGTAGACTAACTAAGGATGAGAAGATAATTGTTGTTGATATGACAAAGTCAATGGTCAGACCCATAAATATTCTTCTAATGTTGAAAGAGTATAATGTCAATAGTTATACAATGATCAAACAAATATACAATGCAAGAAATGCTTACCGTTCTTCCGTAAGAGGCAATAATACTGAAATGCAACAACTAATGGGGCTTCTTGAATGGGATCAATATATTCATTGGCATAGATTAAAGGATGAATATGTTGTGCGTGACATATTTTGGAGTCATCCTGATGCAGTCAAATTAACTAATGTCTGTAATTTGGTCTTTTTGATAGACAGTACCTACAAGACAAACAAGTACAGACTGTCGTTACTTGATATTGTTGGTGTGACACCAACAGGGATGGCATTCTCTGCTGCCTTTGCCTATTTGGAAGGAGAACATCTGAGTAAAGATGTTTGGGCTCTAGAAAGGTTTCGTCGTCTTTTCCTTAAACGTGATGCACTCCCTAGAGTTATTGTCATTGACAGAGATCTAGCATTGATAAATGCGGTGAAAGTTGTATTCCCTAAGTCCATGAATTTGTTGTGTCAGTTTCACATTGATAAGGATGTGAAGGCAAAGTGTAAAACCCTTGTTGGTCAAAAAAATGCATTGGATTATGTAATGGAAGCCTGGGAGAGTTTAGTGGATTGTCCTTTTGAGCAACAGTTTGATGACTGCCTTAAGAAGTTTGAAGTTGATTGCTCACCATAG 1215 0.3802 MSFGLQFALMQTFSATLIDEDQWMYDCVMSEEVYMNDQNEDEGGMNEEHVFATHDDVLQWAQFVAYEIGFVAVIMRSNTKNGIRGRTSFILIGCERSGQYRAKKKDLVRTCTGSRKCGCPFKLRAKPVVGGEGWMVNLICGRHNHELAKSLIGHPYVGRLTKDEKIIVVDMTKSMVRPINILLMLKEYNVNSYTMIKQIYNARNAYRSSVRGNNTEMQQLMGLLEWDQYIHWHRLKDEYVVRDIFWSHPDAVKLTNVCNLVFLIDSTYKTNKYRLSLLDIVGVTPTGMAFSAAFAYLEGEHLSKDVWALERFRRLFLKRDALPRVIVIDRDLALINAVKVVFPKSMNLLCQFHIDKDVKAKCKTLVGQKNALDYVMEAWESLVDCPFEQQFDDCLKKFEVDCSP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g1016 404 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 82 400 - -
Gso4g1016 404 Pfam MULE transposase domain 261 356 IPR018289 -
Gso4g1016 404 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 400 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g1016 Gso-Chr4 14962384 14966763 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso4g1016 MULE 1.6e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g1016 - - gsj:114410600 831.247