Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0995 ATGGATAAGATTCTGGAGGCCGATGCAAATAATATGTCTCAGCATTCCTCGTCTTCAGTTGTTGCTCTAGCAATCAAGGGTAACAAGAAAAGCAAATATGTGGTACAATGGGCACTTAATAAGTTTGTTCCTGAGGGAATGATTATCTTCAAGCTGATTCATGTCCATGGTGGTATAAAAGGAGTTCCAACGCCATTGGGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCATTCAAAAAGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCTTTCAAGAGAATGTGTGAGCAAAGAAAGGTGCATGTGGATGTTATAGTGATTGAATCAGATGATGTGGCAACTGCAATAGCAGATGAAGTTGCTAAGGGTGCTATAACCAAACTTGTTGTTGGAGCTTCATCTCGTGGCTTATTTAAAAGTAAACAGAAGGGTATGTCTACAAGAATATCAGTATCCACTCCAAGATTTTGTACAATTTATGCTATTTCTAAGGGAAAATTGTCCATTCGGCCATCAGACATGCCTATTGATGGAAATATTATAGATGACGCTAGTGAAAGTGAAACCAGTTTGTCCACCAGCAGCTCATCTAACTACACTTCCACCTCTCAGACAGAATCTGCCTCAGTTTCATCATATGCTGCTTTACAGTCCTCTTCCCTAACAACACAACGATTTCAAGCTCTTTCAAGTATAAATAGTGCCCTTCTTAGCACAAATCCAAGTTTTGCTGACACTAACCATTCTAGAGGCCAATCTCTAGATCTTGGGAGAGAAAATACTGCTTCAAGTTCTGCTAGAAACTCAGACATTGATCATGCCTTAAGTCGAGTCTCTAGTTGCAAAAGCTTCATTTCAGATACTGAATCTTGGATGTATGATCAAAATTCTAGCAAGGATGTGCAACTAGCAACTACACTTCCATCACCTAATAGGCAGGCAAAATATAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAACTGAGAAAATTGAAGCATCCAGAAAGCTAAATGACCTAAGCAAGAGACGATCAGAAGAAACCATGAGAATGAAAGAGATCATTTCTAAGGAGGAGAAGGCAAAAGAATTAGCAAAACTAGAAAGAGAGAAATATCAAGATGCATCACGAGAAGCTGAATATTTGAAAGAATGTGCTGAAAGAGAAGCGGCAGAAAAGAAAGAAATGGAGTTGAGAGCCATTCGTGCTGCAAAAGAGAAAGAAAAGCTGGAGGATGCTCTCAGTGGTTCCACGCCCCAGTACCGGAAGTTTACATGGGATGAAATAATCTTAGCTACTTCATCTTTCTCCGAAGATCTGAAAATTGGAATGGGAGCGTACGGAGTAGTATACAAGTGCAATTTGTATCACACAACTGTTGCTGTGAAAGTTCTCACTCTCAACACTAACGTAAACAGCAAAAGAAAGCAATTCCAGCAGGAGTTAGAGATTTTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCGGATCATGGATGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGAGGACAGACTACTACGAAAAAACAACACTTCCCCAATCCCATGGTTTGAGAGGTTTCGAATAGCTTTGGAAGTTGCATCATCTCTCGCCTTTCTTCATAGCTCAAAGCCAGAACCTATCATTCATCGTGACTTGAAACCGGCAAACATCTTGCTTGATCGTAACCTTGTCAGCAAGATTGGTGACATCGGCCTTTCTACAGTACTTAATTCAGATAATTTGTCTATCATGTCCAAAGACACTGCACCTGTTGGGACACTCTGCTACATAGATCCTGAGTATCAAAGGACCGGGTTGATATCTCCAAAATCTGACATTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAGGTTGAAACAGCTATTGATAGCGGGAATTTAACAGACATACTGGATCCAGAGGCTGGAGCTTGGCCATATCAAGAGACACTAGACTTGGCTTTGCTAGGATTGAGCTGTGCAGAACTTCGGCGAAGAGACCGGCCTGATTTACAAGATCATGTCCTTCCAACACTAGAGAGATTGAAAGAAGTTGTTGATAGGGCCCAATGCTCAGCTTCAATTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGACCCTTGTGTTGCTGCTGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTGAAGAGAACGACAAATCACCAATGACGAACATGGCTTTACCTCATAAGCATTTAATTCCTAATTACACACTGCTCTCAGCAATTTTGGAGTGGAAGTCCAGAGAATCGTGA 2433 0.4077 MDKILEADANNMSQHSSSSVVALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHGGIKGVPTPLGNVIPLSQVRNDVATAFKKEVEWQTNQMLLPFKRMCEQRKVHVDVIVIESDDVATAIADEVAKGAITKLVVGASSRGLFKSKQKGMSTRISVSTPRFCTIYAISKGKLSIRPSDMPIDGNIIDDASESETSLSTSSSSNYTSTSQTESASVSSYAALQSSSLTTQRFQALSSINSALLSTNPSFADTNHSRGQSLDLGRENTASSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSSKDVQLATTLPSPNRQAKYNLELEKLRIELRHAQGLHAVAQTEKIEASRKLNDLSKRRSEETMRMKEIISKEEKAKELAKLEREKYQDASREAEYLKECAEREAAEKKEMELRAIRAAKEKEKLEDALSGSTPQYRKFTWDEIILATSSFSEDLKIGMGAYGVVYKCNLYHTTVAVKVLTLNTNVNSKRKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTSPIPWFERFRIALEVASSLAFLHSSKPEPIIHRDLKPANILLDRNLVSKIGDIGLSTVLNSDNLSIMSKDTAPVGTLCYIDPEYQRTGLISPKSDIYAFGMVILQLLTAKPAIALAHKVETAIDSGNLTDILDPEAGAWPYQETLDLALLGLSCAELRRRDRPDLQDHVLPTLERLKEVVDRAQCSASIVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLEENDKSPMTNMALPHKHLIPNYTLLSAILEWKSRES* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0995 810 Gene3D HUPs 8 151 IPR014729 -
Gso4g0995 810 Pfam U-box domain 741 808 IPR003613 GO:0004842|GO:0016567
Gso4g0995 810 CDD STK_N 20 172 - -
Gso4g0995 810 SMART Ubox_2 743 805 IPR003613 GO:0004842|GO:0016567
Gso4g0995 810 Coils Coil 373 431 - -
Gso4g0995 810 Gene3D Transferase(Phosphotransferase) domain 1 529 736 - -
Gso4g0995 810 SUPERFAMILY RING/U-box 738 808 - -
Gso4g0995 810 SMART serkin_6 454 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0995 810 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 16 806 - -
Gso4g0995 810 CDD RING-Ubox_WDSUB1_like 744 784 - -
Gso4g0995 810 ProSitePatterns Protein kinases ATP-binding region signature. 460 481 IPR017441 GO:0005524
Gso4g0995 810 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 739 810 IPR013083 -
Gso4g0995 810 SUPERFAMILY Protein kinase-like (PK-like) 436 711 IPR011009 -
Gso4g0995 810 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 23 147 - -
Gso4g0995 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Gso4g0995 810 ProSiteProfiles U-box domain profile. 739 810 IPR003613 GO:0004842|GO:0016567
Gso4g0995 810 ProSiteProfiles Protein kinase domain profile. 454 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0995 810 Gene3D Phosphorylase Kinase; domain 1 432 528 - -
Gso4g0995 810 MobiDBLite consensus disorder prediction 250 276 - -
Gso4g0995 810 PANTHER OS02G0152300 PROTEIN 16 806 - -
Gso4g0995 810 Pfam Protein kinase domain 456 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0995 Gso-Chr4 14248158 14255934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0995 18 807 U-box Gene Family AT4G25160 52.311 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso4g0995 Pkinase 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0995 - - gsj:114409387 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0995 4 14248158 14255934 Gso6g2613 6 47907488 47915821 GST