Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0985 ATGGACCTGAAGCCAAATCTTAACCCTGTCCTTACTGATGCCACACCCTTAACAAGGTCAAGGCTGGGTGTGCCTTCTGGTTTATCACCTTACTCTCCTATAGGGGCAACCTTTCCCCATGGTAACATGCTGGCAATTCCAAGGAAGAAGACAGGAATTCTTGACGATTTTCGTTCTAGCGGTTGGCTCGATGCAATGAAATCGTCTTCTCCTACTCACACTAAGGTATCCAAGGATGTTAGTCATGGGATTGGATCACCTGATTCTGCTTATAGTACCTGGCTGCTAAAGTTTCCATCAGCACTAGCATCTTTTGATCAAATTACCAACTGTGCAAAAGGGAAGAGAATAGCATTGTTTCTGGATTATGATGGGACTCTTTCACCCATTGTGGATAATCCTGACTCTGCTTTCATGTCAGACAATATGCGTGCTGCTGTTAAAATAGTGGCGGAATATTTTCCAACCGCGATAATTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTTGGAGTAAGTGATCTATGTTATGCTGGTAGTCATGGTATGGACATTATTGGTCCTTCTAGACAATCTATTTCTGATAATCACCCTGATTGCATTAGTTCTGCTGACAAGCAGGGTGTTCAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCCATGATTAATGAGGTACTTGGGTTGCTCAAGGAGTGCACAGAAGATATTGAAGGAGCAACAGTTGAGAACAACAAATTTTGTGTGTCTGTGCATTACCGCAATGTAGATGAGGAGAGTTGGCAAATTGTGGGACAACGTGTATATGATGTTCTGAAGGAGTATCCACGTTTGCGTTTAACTCATGGGCGGAAGGTTTTAGAGGTTCGGCCAGTGATTGACTGGGATAAGGGAAAAGCTGTCACATTTTTACTCGAGTCACTTGGACTTAATTGTGATGACGTGCTCGCTATTTATGTTGGGGATGATAGAACAGATGAAGATGCATTTAAGGTTTTGAAAGAAGCTAATAAAGGTTGTGGCATCTTAGTGTCCCGTGCCCCAAAAGAAAGCAACGCAATTTACTCTCTTCGTGATCCCTCTGAGGTCATGGAATTTCTGACATCACTTGCGGAATGGAAATCAAGCATTCAAGCTCGCTGA 1149 0.4282 MDLKPNLNPVLTDATPLTRSRLGVPSGLSPYSPIGATFPHGNMLAIPRKKTGILDDFRSSGWLDAMKSSSPTHTKVSKDVSHGIGSPDSAYSTWLLKFPSALASFDQITNCAKGKRIALFLDYDGTLSPIVDNPDSAFMSDNMRAAVKIVAEYFPTAIISGRSRDKVYEFVGVSDLCYAGSHGMDIIGPSRQSISDNHPDCISSADKQGVQVNLFQPAAEFLPMINEVLGLLKECTEDIEGATVENNKFCVSVHYRNVDEESWQIVGQRVYDVLKEYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNCDDVLAIYVGDDRTDEDAFKVLKEANKGCGILVSRAPKESNAIYSLRDPSEVMEFLTSLAEWKSSIQAR* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0985 382 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 119 337 IPR006379 -
Gso4g0985 382 CDD HAD_TPP 118 367 - -
Gso4g0985 382 Pfam Trehalose-phosphatase 120 363 IPR003337 GO:0003824|GO:0005992
Gso4g0985 382 Gene3D - 215 382 IPR023214 -
Gso4g0985 382 Gene3D - 117 210 IPR023214 -
Gso4g0985 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 382 - -
Gso4g0985 382 TIGRFAM T6PP: trehalose-phosphatase 114 373 IPR003337 GO:0003824|GO:0005992
Gso4g0985 382 SUPERFAMILY HAD-like 118 375 IPR036412 -
Gso4g0985 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 382 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0985 Gso-Chr4 13694775 13700644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0985 113 374 Trehalose Biosynthesis Gene Families AT1G70290 25.448 1.29e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0985 K01087 - gmx:100799726 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0985 4 13694775 13700644 Gso6g2619 6 47981373 47987415 GST