Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0983 ATGAATAATTTTTCTCATGTTCCCCCCGGTTTTAGGTTCCACCCTACTGATGAAGAACTTGTTGATTACTACCTAAGGAAGAAAATTACCTCAAGAAGGATTGACCTCGATGTCATAAAAGATGTGGACCTCTATAAAATTGAGCCATGGGACCTTCAAGAGCTTTGCAGAATAGGAGCAGAAGAGAAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACAGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAAGCAATCTATTCGAAGCATGACTTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGGGCCCCAAATGGACAAAAATCAGATTGGATCATGCACGAGTATCGACTTGAAACAGATGATAATGGCGCACCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAAAAGAGACTAACAACCATGCGTAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGACCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAAGCTCTCAACCTAATTTTCCCTACCAGCAGTTCCAATATCCTTGCAAGAAAGAGTTAGATTTTTCATACCATTTACCTCTCCAGCTTCCATTAGAGAACCAAAAATTGCTCCAATCTGCAGCCTCCAACTCAATGACACCATATGGTATAGAAGAAAACCCTAATGCCATGCAGCCAGCATCAATCATGCAACAAGTTCAACAACAAAATTTTCAAGTGTTTGGAAACAATTCCAATGATCAACAAGTGGCTGATTGGAGAGCTCTTGACAAGTATGTTGCTTCACAACTTAGTCAAGAAGATGCATCCAAAGATCACAATAGTTATTCAAACGCAGACAACATTTTTCAAGTGAAGAACAATAGCACTATTGAACAGTTGAGGGACTTGGACAAGGAAGAAAAGATGGCTGAAAATGCCTCAACATCAACCTCAAGCTGTCCAATTGACATGTGGAAATAG 1026 0.4025 MNNFSHVPPGFRFHPTDEELVDYYLRKKITSRRIDLDVIKDVDLYKIEPWDLQELCRIGAEEKNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDDNGAPQEEGWVVCRVFKKRLTTMRKLSEHDSPCWYDDQVSFMQDLDSPKQSSQPNFPYQQFQYPCKKELDFSYHLPLQLPLENQKLLQSAASNSMTPYGIEENPNAMQPASIMQQVQQQNFQVFGNNSNDQQVADWRALDKYVASQLSQEDASKDHNSYSNADNIFQVKNNSTIEQLRDLDKEEKMAENASTSTSSCPIDMWK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0983 341 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Gso4g0983 341 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Gso4g0983 341 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Gso4g0983 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 330 - -
Gso4g0983 341 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Gso4g0983 341 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 330 - -
Gso4g0983 341 MobiDBLite consensus disorder prediction 327 341 - -
Gso4g0983 341 MobiDBLite consensus disorder prediction 320 341 - -
Gso4g0983 341 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0983 Gso-Chr4 13520671 13526363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0983 1 341 NAC Transcription Factor Family AT1G12260 56.863 2.37e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso4g0983 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0983 - - gmx:100809321 686.026