Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso4g0980 | ATGACAACAATATCAAATTGCTCCCTTCTCTTCCTCTTCCTCTTCCTCTCCACCCTCCACATAGCTTCCACCCTCTCAACCCCCACCAACTTCATCAAGTCCTCCTGCAGCACCACCCAGTACCCAGCCCTCTGCATCCAGTCCCTCTCCGTCTACGCCTCCACCATCCAGCAAGACCCCCACGAGCTCGTCCAGACAGCCCTCTCCCTCTCCCTCAACCACACCGAGGCCACCAAAACCTTCGTCGCAAAATGCAACAAATTCAGAGGCCTCAAACCGAGAGAATACGCTGCCTTGAAGGACTGCGCTGAAGAAATCAGTGACAGCGTCGACCGGCTCAGCCGGTCGCTGAAGGAACTCAAATTGTGTAAGGTGAAGGGTGAGGACTTCACGTGGCACATCAGCAACGTTGAGACGTGGGTGAGTTCGGCTTTGACCGATGAGAGCACTTGCGGCGATGGGTTCGCCGGGAAGGCGCTGAATGGGAAGATTAAGGAGGCGATTAGGGCTAGAATGGTCAATGTTGCTCAGGTTACTAGCAATGCTCTCTCGCTTATTAATCAGTATGCTGCACAACACTAG | 582 | 0.5395 | MTTISNCSLLFLFLFLSTLHIASTLSTPTNFIKSSCSTTQYPALCIQSLSVYASTIQQDPHELVQTALSLSLNHTEATKTFVAKCNKFRGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKVKGEDFTWHISNVETWVSSALTDESTCGDGFAGKALNGKIKEAIRARMVNVAQVTSNALSLINQYAAQH* | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso4g0980 | 193 | CDD | PMEI-like_3 | 34 | 191 | - | - | |
Gso4g0980 | 193 | Pfam | Plant invertase/pectin methylesterase inhibitor | 30 | 185 | IPR006501 | GO:0004857 | |
Gso4g0980 | 193 | SMART | PMEI_2 | 27 | 185 | IPR006501 | GO:0004857 | |
Gso4g0980 | 193 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 27 | 189 | IPR035513 | - | |
Gso4g0980 | 193 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 11 | 193 | - | - | |
Gso4g0980 | 193 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 30 | 189 | IPR035513 | - | |
Gso4g0980 | 193 | PANTHER | PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN | 11 | 193 | - | - | |
Gso4g0980 | 193 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 6 | 189 | IPR006501 | GO:0004857 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso4g0980 | Gso-Chr4 | 13255537 | 13256476 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso4g0980 | 32 | 186 | Carbohydrate Esterase | AT3G14310 | 31.410 | 1.42e-21 | 89.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso4g0980 | - | - | gmx:100305900 | 379.022 |