Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0979 ATGGCTTCAAATCCTCACACTGTTGAAGAGATCTTCAAGGACTATAGCACCCGAAGAATCGTTGCTATTCGCGCTCTCACTCATGATGTTGATAAACTTTACGAGCTATACGATTCAGGAAAGGATAACTTGTGCCTCTATGGACATTCAAATAAGGTCTGGGAAGTAACTCTACCATCAGAGGAAGTTCCAGCAAATCTCCCTGAGCCAACTCTTGAAATCAATTTTGCAAGGGATGACGTTAGCCGCAAGGATTGGATTTCTTTGGTTGCTATGCATAGGGATTCGTGGTTGCTTTCTCTTGCCTTTTACTTTGGATTTCATCTTAATCACAATGAAAGGAAACGTTTATTTGGTTTGATCAACACTCTTTCCACCATTTTTCAATTTGTGACTAACAATAAACCAATTAAGGACATGCCCACCATAGTTAGCGGAAGCAAATTTTGGGGAAGCACCGAGGTTGTTCCTGGTGTGGAGATGATGGGACAGATGGTGAACCAGAAGCTGCAGTTTCTTTTGATGAGGTAG 531 0.4181 MASNPHTVEEIFKDYSTRRIVAIRALTHDVDKLYELYDSGKDNLCLYGHSNKVWEVTLPSEEVPANLPEPTLEINFARDDVSRKDWISLVAMHRDSWLLSLAFYFGFHLNHNERKRLFGLINTLSTIFQFVTNNKPIKDMPTIVSGSKFWGSTEVVPGVEMMGQMVNQKLQFLLMR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0979 176 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 2 2 154 - -
Gso4g0979 176 Pfam Alfin 7 132 IPR021998 GO:0006355|GO:0042393
Gso4g0979 176 PANTHER CPG BINDING PROTEIN 2 154 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0979 Gso-Chr4 13151088 13178135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0979 2 148 Alfin-like Transcription Factor Family AT5G05610 64.189 9.38e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0979 - - gmx:100801343 313.923