Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0968 ATGGCTTCTTCATCGAGTAGCGGATTGACGTTCAAGCTGCACCCTCTGGTGATCGTAAACATCTCGGACCACTACACCAGGGTCAAGTCTCAGATGAACCCAACCCACGCGCCAACGCACAACAACAACAACGCCAACGGCGGCGACGGCGTCGTTTCGCCGCTCTCCCCGCGGGTCTATGGCTGCGTCATAGGGGTCCAGAAGGGCCGCACCGTGGAGATCTTCAACAGCTTCGAACTCCTCTACGATCCTTCCTCCCACTCCCTCGATCGCACCTTCCTCGAGAAGAAGCAAGAACTCTATAAGAAGGTGTTCCCGCACTTCTATATACTGGGGTGGTATTCGACTGGGAGTGATGCAGAGGAATCAGACATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCAGTTTATGTTCTTCTCAATCCTTCTATCAATCATTCTCAGAAGGATCTACCTGTCAGTATTTTTGAAAGTGAACTGCATGTCATAGATGGGATTCCACAACTTATCTTTGTTCGCTCAAGCTATACTATTGAGACTGTTGAAGCAGAACGAATATCAGTTGATCATGTTGCTCATCTTAAGCCATCTGATGGTGGTTCAGCTGCTACACAATTGGCTGCTCACCTTACTGGAATACACAGTGCCATCAAAATGCTTCATAGCAGAATAAAGGTGCTACATCACTATCTTCTTGCAATGCAAAAAGGTGATGTTCCTTGCGAGAATTCACTATTAAGACAAGTGTCAAGTCTCCTGAGAAGATTGCCTGCTATTGAATCTGGCAAATTTCAAGATGATTTCTTGATGGAGTACAATGACACCTTATTGATTAGTTACCTGGCAATGCTGACCAACTGCTCAAGTGCTATGAATGAACTGGTGGACAAATTTAATATTGCGTATGATAGGCATAGCAGAAGGGGTGGACGAACTGCTTTTATGTGA 957 0.4556 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPTHNNNNANGGDGVVSPLSPRVYGCVIGVQKGRTVEIFNSFELLYDPSSHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNELVDKFNIAYDRHSRRGGRTAFM* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0968 318 Gene3D Cytidine Deaminase, domain 2 1 199 - -
Gso4g0968 318 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 6A 2 318 - -
Gso4g0968 318 SMART pad1_6 10 164 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gso4g0968 318 MobiDBLite consensus disorder prediction 31 50 - -
Gso4g0968 318 ProSiteProfiles MPN domain profile. 11 165 IPR037518 -
Gso4g0968 318 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 7 137 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gso4g0968 318 CDD MPN_CSN6 9 314 IPR033859 GO:0000338|GO:0008180
Gso4g0968 318 Pfam Maintenance of mitochondrial structure and function 185 299 IPR024969 -
Gso4g0968 318 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0968 Gso-Chr4 12491076 12501678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0968 2 269 Eukaryotic Initiation Factors Gene Family AT2G39990 22.711 1.54e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0968 K12179 - gmx:100797079 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0968 4 12491076 12501678 Gso6g2638 6 48188450 48194479 GST